Zingiber officinale (ginger): 122034516
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Entry
122034516 CDS
T08725
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122034516
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122034516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122034516
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122034516
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
TMEM237
DUF3641
Motif
Other DBs
NCBI-GeneID:
122034516
NCBI-ProteinID:
XP_042449734
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Position
11B:complement(8485402..8493558)
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AA seq
268 aa
AA seq
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MKKLGNCISQEKLTDNFVPTYLTSLSFLSAPKAPAELNAKVGTLKMVKLTLVGRLRDGLP
MSQAPAHLNEDNLVLSSYKYKAELVLKEISRGALTNPKMTVLIDHHCFHCLVGDGICCIA
LCESWYPRKLAFYYLQDLRNALAKVDRRVLESFSEPYAFKRFDYVIGKIRERYLDTRTQE
NLFKLNSDRRNDPDIATEELANIMRSCHSSGSEARTSASAQTKSTIWSSQVLEVIALKWT
PITIIVAVIAILVWTRIVLNEYDMLTAW
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttaggcaactgtatatcccaagaaaagcttactgataactttgttccaact
tatctcacctccttaagctttctttctgctccaaaagctcctgctgaattgaatgcaaaa
gttggcactctaaagatggtgaagctaaccttggttggaaggttgagggatggactgcct
atgtcacaagcaccagctcacttgaatgaagataatcttgtcttgtcatcctacaagtat
aaggcagagcttgtgctcaaggagatctcaagaggagccttgacaaaccccaagatgaca
gtccttattgatcaccattgtttccattgtctagttggagatggaatttgctgcatcgcc
ctatgtgagtcatggtacccaaggaaattggcattttactatcttcaggatctccgaaat
gcacttgcgaaggttgataggagagttttagagtcattctcagagccatatgcatttaaa
agatttgattatgtcattggcaaaatcagagagagatatttggacacaagaacacaggag
aatttatttaagttgaattctgatcgccgaaatgatcctgatattgcaacggaggaatta
gccaacataatgaggagctgccattcatcaggatctgaagcaagaacatctgccagtgct
cagacgaagtcgacaatttggagctcacaagttcttgaggtgattgccctgaaatggaca
ccaataacaattattgtggccgtaattgcaatactcgtttggacgcgtattgtcctgaac
gagtacgatatgttaacagcatggtga
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