Zingiber officinale (ginger): 122034570
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Entry
122034570 CDS
T08725
Name
(RefSeq) tubulin alpha-2 chain-like isoform X1
KO
K07374
tubulin alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04145
Phagosome
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122034570
09142 Cell motility
04814 Motor proteins
122034570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122034570
03036 Chromosome and associated proteins [BR:
zof03036
]
122034570
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122034570
04147 Exosome [BR:
zof04147
]
122034570
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122034570
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122034570
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122034570
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122034570
Exosomal proteins of other body fluids (saliva and urine)
122034570
Exosomal proteins of colorectal cancer cells
122034570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
122034570
NCBI-ProteinID:
XP_042449806
LinkDB
All DBs
Position
11B:complement(88308665..88312207)
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AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMLSDKTIGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPNVIDEVRTGAYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTIQFVDWCPTGFKCGINYQPP
TAVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAECPVDEEGEEDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatctcgatccatatcgggcaggccggtattcaggttggaaatgcctgt
tgggaactttattgcctcgagcacggcatccagcctgatggccaaatgcttagtgataaa
accattggtggcggcgacgatgcattcaacacctttttcagcgagactggagctgggaag
catgtcccccgtgcggtctttgttgatttagaacctaatgtcatcgatgaagtaagaact
ggcgcataccgccagctcttccaccctgaacagctaattaacggcaaggaagatgctgca
aataacttcgcccggggccactataccattggcaaagaaattgttgatctctgccttgat
cgcatcagaaagctagccgacaattgcactggtctccaagggttcctggttttcaatgct
gttggtggaggcactggctctggccttggttcacttctccttgagcgtttgtccgtggac
tacggcaagaaatctaagttgggtttcactgtctacccatctcctcaggtctctacctct
gtggttgagccctacaacagtgttttgtcgacccattctcttctggagcacactgatgtg
tccgttctccttgacaatgaggcaatctatgacatctgtaggcgttccctcgacattgaa
cgccccacctacaccaatctcaatcgcctcgtttctcaggtcatttcttctttgaccgca
tcactgaggttcgatggtgctctgaacgtcgatgtcaccgagttccagaccaatctggtt
ccatatccaaggatccacttcatgctctcatcctatgcccctgtcatctctgcggagaag
gcttaccatgaacaactctccgttgctgaaatcaccaataccgccttcgagccttcttcc
atgatggcaaaatgcgacccgcgtcatgggaagtacatggcttgttgtctcatgtaccgt
ggagacgtcgtgcctaaggatgttaatgccgctgttgtcaccatcaagaccaaacgcacc
attcagttcgtcgactggtgcccgaccgggttcaagtgcgggatcaactaccaaccgcct
actgcggtgcctggcggtgatctggccaaagtgcagagggctgtgtgcatgatatccaac
tccaccagcgtcgctgaagtcttctcacgcatcgatcacaagttcgacctcatgtacgcc
aagagggccttcgtgcactggtatgttggtgagggaatggaggaaggagaattctctgag
gctcgtgaggatcttgctgcacttgagaaggactacgaggaagttggcgcagagtgccct
gtggatgaagaaggcgaagaggatgagtattaa
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