Zingiber officinale (ginger): 122034666
Help
Entry
122034666 CDS
T08725
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.8-like
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122034666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122034666
NCBI-ProteinID:
XP_042449920
LinkDB
All DBs
Position
11B:complement(81130064..81132165)
Genome browser
AA seq
614 aa
AA seq
DB search
MVVEMVVLTESGYAVAKLGPATNEKDSEKLRFIEEVTENTDAVQGKVLAEILRRNAETEY
LRRYGLDGATDRTAFKAKVPVVAYEDLQPDIQRIANGDRSAILSAHPISEFLTSSGTSAG
ERKLIPTIKEDLDRRQLLYSLQMPVLNCYVPGLNQGKGLYFLFVKSEMKTPGELTARPVL
TSYYNSEHFKNRPYDPYNVYTSPTAAILCTDAFQSMYAQMLCGLLQRLDVLRVGAVFASG
LLRAIRFLQIHWQDLCNDIAAGSLTTKVTDPSVRAAVAELLSQPDRALAGFLAAECSKGD
WAGIITRIWPNTKYLDVIVTGAMAQYISTLEYYSGGLPMVCTMYASSECYFGLNLRPICK
PSEVSYTIMPNMGYFEFLPQGDGHVQDQSQQLADLADVEVGKEYELVITTYAGLNRYRVG
DILRVTGFYNAAPQFRFVRRKNVLLSIESDKTDEAELQRAVEIASALLRPYDATVVEYTS
HAYTKSIPGHYVIYWELLAKGTSNGDEALEALQVQRDGVMARCCLAMEEALNAVYRQSRV
ADASIGPLEIRVVRGGTFEELMDYAISRGASINQYKLPRCVTFPPILELLDSRVVSTHFS
PAPPTWSPHRRPAN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgagatggtggtgcttacggagagcgggtacgctgtggccaagctcgggccc
gccaccaacgagaaggactcggagaagctgaggttcatcgaggaagtgacggaaaacacg
gacgcggtgcaggggaaggtactggcggagatactgaggcgcaacgctgagacagagtac
ttgcgaaggtacgggctcgacggcgccaccgaccgtaccgccttcaaggccaaggtcccc
gtggttgcctacgaggacctgcagccggacatacaaagaatcgccaacggagaccgctcc
gccatcctctccgcccacccaatctccgagtttctcaccagctccggcacgtctgctggc
gagagaaagctgataccgaccatcaaagaggacctcgaccgccggcaactcctttacagc
cttcaaatgcccgtgttgaactgttacgtgccggggctgaaccaagggaaggggctctat
ttccttttcgtaaaatcggagatgaagactcccggcgagttgacggctcggccggttctg
acgagttactacaacagcgagcacttcaagaaccgcccctacgacccctacaatgtgtac
accagccccaccgccgccatcctctgcaccgacgcctttcagagcatgtacgctcagatg
ctctgcggcctgcttcagcgcctcgacgttctgcgcgttggggccgtcttcgcctccgga
ctcctccgtgctatccgcttcctccagatccactggcaggacctctgcaacgacatcgcc
gccggctctctcaccaccaaagttaccgatccctcggtccgcgccgccgttgccgagctc
ctcagccaaccggaccgggcgctagcggggttcttagctgccgagtgcagcaagggcgac
tgggccggcatcatcacccgcatctggcccaacaccaagtacctcgacgttatcgtgacg
ggcgccatggcgcagtacatttccaccctggagtactacagtggtggcctccccatggtt
tgcaccatgtacgcctcctcggagtgctacttcggactcaacctccgtcctatatgtaaa
ccttcggaggtctcctacaccatcatgcccaacatgggctacttcgagttcctcccacaa
ggcgacggccacgtccaggaccagtcccagcagctggcggatctggcggacgtggaggta
ggcaaggaatacgagctggtgatcaccacctacgccggtctgaaccgctaccgtgtgggc
gacatcctgagggtgaccgggttctataacgcggcgccgcaattccgattcgtccgccgc
aagaacgtgctcctcagcatcgagtccgataagaccgacgaggcggagctacagcgggca
gtggagatcgcgtcggcgctgctgagaccctacgacgccaccgtggtggagtacacgagc
cacgcctacaccaagtccatccccggccactacgtcatctactgggagctgctcgccaag
gggacctccaacggcgacgaagcactggaggcgttgcaggtgcagcgcgacggagtgatg
gcacggtgctgcttggccatggaggaggcattgaacgcggtttaccggcagagccgggtg
gcggatgcgtcaatcgggccgctggagatccgcgtagtgcgcggcggcacgtttgaggag
ctcatggactacgccatctcaaggggggcatcaatcaaccaatacaaactgccgcgctgc
gtcaccttcccgccgatactggagctcctggactcccgcgtcgtctccacccacttcagc
cccgcgccgcccacgtggtcgccgcaccgccgcccggcaaactga
DBGET
integrated database retrieval system
