Zingiber officinale (ginger): 122034750
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Entry
122034750 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122034750 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122034750
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
122034750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122034750
NCBI-ProteinID:
XP_042450023
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Position
11B:complement(84255324..84261006)
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AA seq
785 aa
AA seq
DB search
MPILRSIAASLGSPPETLETTPPPSVEASADETIHSSRTSPAASSLFHQSSTEMDHSGAT
PPLRRSLRLASMSNASFVTDSPAVTNRGGRKNSLSSASKTTVEVEAPPTVCKADAEEIKV
LEVPEGSPTLLNHKRKDFDDSVGGKYMCLRSGSKLARVGFDQMSGDTNEAQTEMLTSGPQ
RVHEGFSNGIDVDMVAENLEEKIGGERFSTQLKGKGILIEAVPEEQQAGKVNPTIENAEY
ENKGKGKLVEEEDLLSISAAEVDMDADAAVAKDVARYSGYANTSTRKSKRQNEYRKEVVR
SRAIELAPKFAFFKPEDDKQEAEGQEDPEDLPPDANNEDWPGPFSTALKIIEDRNQKLRT
RESNNYFKKGQNDKSRISWVPTKNRNPMARVPSTLRDLCVKILLENAEEIESLDGIPDLL
KHWLILKLCHSRKMNPHLLSHLVSATPTEICLSDCSWLTEVQFENIFSQCDVKCLKVLQL
DRCGRCLPDYVLRSTLAHYPNGLPSLTRLNLKGAYRLSDDGLNAVVASAPSLSSINLSEC
PLLTSMGIINLADKLGTVLTELYIDGCQNVDAMAILPALKKVNHLEVLSVGGLQSVCDKF
VHQLIPICGSHMRELTLAGCEKLSNASIRTIGAHCCRLFAIDLQNLKRLNDSSIGYLANG
CRSLQKLKLRRNAFSDEAIAAFLEASGGSLAELSLNNVAKVAEQTALAISRRCCSTLYSL
DLSFCREMTDEALGLIVDNCSSLRFLKLFGCTQVTEVFFNGHSNSSLKVIGPKGQLLDDS
DMSLF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcctaaggtctattgccgcttctttgggttctcctcccgaaaccctagaaacc
actccgccgccttctgtagaagcttccgccgatgagacaatccactcttccaggacctct
cctgcagcgtcctccttgttccatcaatcgagcactgagatggatcactctggagcgacg
cctcccctaaggaggagcctccgcctcgcatcgatgtccaatgcttccttcgtgaccgac
tcacctgctgtgaccaatcgtggtggcaggaagaactccctttctagcgcctcaaaaact
acggttgaagtggaggctccgccgaccgtttgcaaggcagacgcggaagagattaaggtg
ttggaggttcctgaggggtctcctactttacttaaccataagagaaaagattttgatgat
tctgttgggggaaagtacatgtgtctcaggtctgggtctaaacttgctcgggtaggattt
gatcaaatgtcgggagatacaaatgaagctcaaactgagatgttgacatcaggtcctcag
cgtgttcatgaaggcttttcaaatggaattgatgtcgacatggttgcagagaatttggag
gagaaaattggcggagaaaggttctccactcaattaaaagggaagggaatactgatagag
gctgttccagaggaacagcaagctgggaaagtgaatccaacaatagaaaatgctgagtat
gaaaataaggggaagggaaagttggtcgaggaagaagacttactgtcaattagtgcggct
gaggttgacatggatgctgatgcagctgttgcaaaggatgttgctagatactcgggatac
gctaacacaagtactagaaaatcgaaaagacaaaatgaatatagaaaagaagttgtcagg
tcaagagctatagagttggctcccaaatttgccttctttaaaccagaagatgataagcaa
gaggcagaaggacaagaggatcctgaggacttacctccagatgctaacaatgaggactgg
ccagggccattttctactgccctgaagatcattgaagacagaaatcaaaagctgagaacc
cgagaatcaaataattattttaagaaaggtcagaatgacaaatcaaggatttcatgggta
cccacaaaaaaccgcaatcctatggcaagggtaccttcaaccctgcgagacttgtgtgtt
aaaattctcttagaaaatgctgaagaaattgagtcacttgatggcattcctgatttgcta
aaacactggttaatattaaagttgtgccattctaggaaaatgaatccgcatcttcttagt
catcttgtgagtgctactcccacggagatatgcctcagtgactgttcatggctaacagaa
gtccagtttgagaatattttttctcaatgtgatgtgaaatgcttaaaggtgttgcaacta
gacaggtgtggaagatgtttgcctgactatgttttgcgttctaccttggcccattaccct
aatggtttgccttcattaactagactaaatctcaagggtgcttatcggctttcagatgat
ggcttaaatgcagttgttgcttcagcaccttccttaagttctataaatttgtcagagtgc
ccccttcttacctcaatgggaatcataaatttagctgacaagttgggcactgttttgaca
gaactatatatagatggttgccaaaatgttgatgctatggctattctacctgcactcaag
aaagtaaatcatttagaagttctgtcagtcggtggacttcagtctgtttgtgataagttt
gtacaccagcttattcctatttgtggttcacacatgagggaattaaccttggcaggatgc
gagaaactgtctaatgcttccattagaactattggtgcacattgttgtagactatttgct
attgatcttcagaatttgaaaagattgaatgattcttctataggatatcttgccaatggt
tgtagatcacttcaaaaacttaagcttcggcgtaatgcattcagtgatgaggctattgca
gcattcttggaagcatctggaggttcattggctgaactttccctaaataatgttgcaaag
gttgcagaacaaactgctctagccatttctcgccggtgttgctccaccttgtacagtcta
gatttgtcattttgtcgagaaatgacagacgaagcacttggtttgattgttgataattgt
tcatcattgaggtttctgaaactatttggatgcacccaggtcactgaagtgttcttcaat
ggtcactcaaactcgtctcttaaagtgattggacctaaagggcagctgctggatgacagt
gatatgtctttattttga
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