Zingiber officinale (ginger): 122034880
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Entry
122034880 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122034880
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122034880
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122034880
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122034880
03036 Chromosome and associated proteins [BR:
zof03036
]
122034880
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122034880
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122034880
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122034880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Ax_dynein_light
Motif
Other DBs
NCBI-GeneID:
122034880
NCBI-ProteinID:
XP_042450176
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All DBs
Position
11B:85158967..85161654
Genome browser
AA seq
487 aa
AA seq
DB search
MLNRFINFGSRKLPNPEAEEPPVVAVNHASRATAATPPPPAPSPAVAPVSPNIEVLPPFG
EVAAGERQALFLRKLQLCAVVFDFSDALSLRCARERETKRRAFQELVDFVQSGSGRLSEQ
VQEELVRTVAANIFRCLPPAAHENTGGDASADPEEENVFLDPAWPHLQLAYELLLRYVIS
TDTDTKIAKRFIDHSFVLRLLDLFDSEDPREREYLKTILHRIYGKFLVHRPFIRKAINNV
FYGFIFETERHNGIGELLEILGSVINGFTLPMKEEHKLFLVRALIPLHKTKAVSVYHQQL
AYCTTQFVEKDYKLADTVIRCLLKYWPVTNCQKEVLFLGELEEMLEATQPVEFQRIMIPL
FKRISCCLNSSHFQVAERALYFWNNDHIVTLIAQNRGVILPIIFEALEKNMQSHWNQVIN
ALTANVRKMFEDMDGNLFSECQQQYIEKEANANALKEQREVAWRQLEAVAVAVAAARAAG
EKMILVN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccggtttatcaatttcggaagccggaagctccctaatcctgaggcggaggag
ccccctgtggtggccgtcaaccacgcctctcgggccactgccgccacgcctcctcctcca
gcgccatcccctgctgtcgcacccgtcagccccaacatcgaggttctcccgccattcggc
gaggtagctgccggggagcgccaagccctttttcttcgcaagctccagctttgcgccgtc
gtcttcgacttctccgacgctctctccctccgctgcgcccgagagcgggagacgaagcgg
cgtgcgtttcaggagctcgtcgacttcgtccagtccggctccggccgcctctccgagcag
gtacaggaggagctcgtccgcaccgtcgccgccaacatcttccgatgccttcccccggcc
gcccacgagaacaccggcggcgatgcctccgccgatcccgaggaggagaatgtgttcctc
gatccagcgtggccccatctccagctcgcctacgagcttcttctccgctacgtcatctcc
actgacaccgacaccaagatcgccaagcggttcattgaccattcctttgtgctccgcctc
ctcgacctcttcgactccgaagacccccgcgagcgcgaatacctcaagaccatcctccac
cgtatctacggaaagttcctggtccaccgtccattcatccgcaaggccatcaacaacgtc
ttctacgggttcatcttcgagacggagaggcacaacggtatcggagagcttctggaaatt
cttgggagcgtcatcaatggctttaccctgcccatgaaagaggagcataagttgttcctg
gtgcgggcgctcatcccgctgcacaagaccaaggcggtgagcgtttaccaccagcagctg
gcctactgcaccacgcaattcgtggagaaggactacaagcttgcagacacggtgattcga
tgcctattgaagtactggccggtgaccaactgccagaaggaggttctgtttctgggggag
ttggaggagatgttggaggcaacgcagcccgtagagttccagaggatcatgattcccttg
ttcaagagaatttcatgctgtctcaacagctctcacttccaggttgctgaacgggcttta
tatttctggaataatgatcatatcgtgaccttgattgcccaaaaccgtggtgtcatattg
cccataatattcgaagcactggagaagaacatgcagagccactggaaccaagtgatcaat
gccctcacagcaaatgtgcgcaagatgttcgaagacatggacggcaatctcttttcggag
tgtcaacagcaatacattgagaaagaagcaaacgccaacgccttgaaagagcaacgagag
gttgcatggagacaactagaagctgtagctgtggccgtcgctgcagctagagctgcggga
gagaagatgattctagtcaattaa
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