Zingiber officinale (ginger): 122034935
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Entry
122034935 CDS
T08725
Name
(RefSeq) nuclear ribonuclease Z-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122034935
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
122034935
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
122034935
Prokaryotic type
122034935
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
122034935
NCBI-ProteinID:
XP_042450229
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Position
1A:138066695..138069655
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AA seq
281 aa
AA seq
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MGSRRSKADSEASAEQSSLVPRKKPLVIEGYPVEGLSIGGQETCVIFPSLKLAFDIGRCP
QRAISQEFLFITHGHMDHIGGLPMYVATRGLYSMKPPTIFVPVSIKEHVEKLFEVHRAID
QSELKHNLVALNVGEEFQLRNDLKVRAFKTYHVIPSQGYCIYSVKKKLKAEFCGLSGNEI
KSLRLSGVEITDTITTPEIAFTGDTMSDFVVDPDNSDVLNARILVMESTFVNDSMSVQHA
RDYGHTHLFEIASYENRFQNKAILLIHFSARYYPEVSHCHF
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcgcagaagcaaagcggatagtgaagcaagtgctgaacagtcttcgttagtt
ccaagaaagaagccactggtgatcgaagggtatccagttgaggggttgtcaattggaggg
caggagacttgtgtcatcttcccgtcacttaagttggcctttgacattggtagatgcccg
cagcgagccatttcccaggaatttctgttcattacccatggccatatggatcacatagga
ggacttcctatgtacgttgctactagaggattatatagcatgaagcctccaactatcttt
gtcccagtgtctataaaagaacatgtggaaaaactgtttgaggtgcacagggcgattgac
caatctgaactgaagcacaatttagtcgcccttaatgtaggcgaagaatttcaattgaga
aatgatcttaaagttagagcattcaagacctaccatgttatacctagccagggttattgt
atctactctgtcaaaaaaaagcttaaggcagaattttgtggtctttctggaaatgagatt
aagagcttgcgactatcaggtgttgagattactgacacaataacaactcctgaaattgcc
ttcacgggagatacgatgtcagattttgttgttgaccctgacaattctgatgtacttaat
gcaagaattcttgtgatggagagcacttttgtgaatgactcaatgtcagttcaacatgct
agggattacggccacacccatttgtttgagatcgcaagttatgagaaccgattccaaaat
aaagcaattttgctcatccatttttcagctcgttattatccagaggtaagtcattgccat
ttctga
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