Zingiber officinale (ginger): 122035213
Help
Entry
122035213 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122035213
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122035213
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122035213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
vWA-TerF-like
zf-C3HC4
TerY_C
Sina_RING
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122035213
NCBI-ProteinID:
XP_042450561
LinkDB
All DBs
Position
11B:71046918..71053296
Genome browser
AA seq
479 aa
AA seq
DB search
MGAKSSAEGRSRETRTSTPYRGTEHAEPPYSAHEWDPHSSHHPYRSHHRHSHFHSLHEFH
PVAFPSESSHFRLFPPAGYPSVPPNNTVRNQRRRSNSPTGGKRPKLEHRYSRIADGFTSL
NQVTEELAKSGLESSNLIVGIDFTKSNEWTGKNSFHGCSLHHIGTTKNPYEQAISIIGLT
LSKFDEDNLIPCFGFGDASTHDQDVFSFYPGNRPCQGFEEALDRYREIAPFVRLAGPTSF
APIIEMAMTIVEQSVGQYHVLLIIADGQVTRSVDTETGRLSPQEQKTVDAMVKASKYPLS
IILVGVGDGPWDMMHEFDDNIPSRSFDNFQFVNFTEIMSKDAPESRKEMEFALAALMEIP
LQYRATLDLGILGQHANTSPRRVALPPPAAVPNSAPIGSQSFHSSPDSMQSFSSSSDSTT
PALTVSVASTSSDTVCPVCLANLKNMAFGCGHQICRECGPLLSSCPICRRAVETRINLY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggggctaaaagctcagccgaagggagaagccgggaaacaaggacttccactccttac
cgtggaacagaacacgctgagccgccctactcagcacatgaatgggatccccatagcagt
catcatccctatcgcagtcatcaccgccacagccattttcattctctgcatgagttccat
cccgtggcattcccttccgagtcgtcccacttccggttgtttccaccggcaggctaccca
tcggtgcctccaaataacacagtccgcaatcagaggaggaggagcaattctccaaccggt
ggaaagaggcccaagttggaacacaggtactcaaggatagccgatggcttcacttccttg
aaccaggtaactgaggagctggcaaaatctgggcttgagtcatcaaacctcattgtagga
attgacttcacgaaaagtaatgagtggacaggtaagaattcattccatggctgcagcttg
caccacataggaactactaaaaatccttatgaacaagcaatctccattattggactgacc
ttgtcaaaattcgacgaagataacttaatcccatgctttggtttcggagatgcatctacc
catgaccaagatgtatttagcttctacccagggaatagaccatgtcagggttttgaggaa
gctttagatcggtatcgagaaattgctccatttgtgcgattagctggaccaacatctttt
gcaccaattattgaaatggccatgaccattgtggagcagagtgtagggcaataccatgtt
ctattaataattgctgatgggcaggtaacaagaagtgtagatactgaaactggtcgatta
agcccccaagaacagaagacagttgatgctatggtcaaagctagcaaatatcccttatcc
attattttagttggagttggagacggaccatgggacatgatgcatgaatttgatgacaac
ataccttctagatctttcgataatttccagtttgtgaatttcacagaaattatgtccaag
gatgcaccagaaagtcgtaaagagatggagtttgctcttgcagcacttatggaaatacct
ttgcagtacagagcaacattggatcttgggattttaggtcagcatgccaatacatcacca
agaagagtggcccttcctcctcctgctgctgttcccaattcagcaccaattggctcacaa
tcttttcattcctcacctgattctatgcaaagcttctcatcttcttctgatagtacaact
ccagctctaacagtgtcagttgcaagtacctcttcagacacggtttgcccggtttgtctt
gccaacctcaaaaacatggcatttggctgtgggcatcagatatgtcgtgaatgtgggcca
cttctcagctcctgccccatttgccgtagagcagttgagacaagaataaatctgtattga
DBGET
integrated database retrieval system
