Zingiber officinale (ginger): 122035389
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Entry
122035389 CDS
T08725
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122035389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122035389
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122035389
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122035389
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122035389
Exosomal proteins of other body fluids (saliva and urine)
122035389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
SKN1_KRE6_Sbg1
DUF3675
Motif
Other DBs
NCBI-GeneID:
122035389
NCBI-ProteinID:
XP_042450731
LinkDB
All DBs
Position
11B:complement(87628303..87629568)
Genome browser
AA seq
313 aa
AA seq
DB search
MNNLITKSFYSYADLKKEVLKDLESGGEEVEVAIEMAAAGADGHLLQFFEEAELVKEEMA
SVRDLLARLQAANEESKSSHKPEALRRLRDRINADIVQVLKTARDIRGRLESMDRSNAAN
RRLSGCREGTPVDRTRTAVTNGLRKKLKEMMMEFQALRQRMMAEYRETVERRYFTLTGEA
ASEEVIERIISDGDSEGMMRKAMLEQGRGIVAAAVQEIQDRHDAAKEVERSLLELHQVFL
DMAVIVETQGEQMDDIEHHVASAAHYVKDGTKELKSAKEYQRSSRKWLCIAIIFLLILVL
FVVIPIATSFKHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcatcaccaaatccttctacagctatgcagatctcaagaaggaggtccta
aaggacctcgaatcgggcggcgaggaggtcgaagtggccatcgagatggcggctgccggc
gcggacggccacctactccagttctttgaggaggcggagcttgtgaaggaggagatggcg
tccgtccgcgatctccttgcgcgtctccaggccgccaacgaggagagcaagtcgagtcac
aagccggaggccctccgccgcctccgagaccggatcaacgccgacatcgtccaggttctc
aagacggcccgcgacatccgcggccgcctcgagtccatggatcgttcgaacgccgcgaac
cggcgtctgtcaggctgccgggagggcacgccggttgaccggacccgaaccgccgtcacc
aacgggcttcggaagaagctcaaggagatgatgatggagttccaggcgctgcggcagagg
atgatggcggagtaccgggagaccgtggagcggcgctacttcaccctgacgggcgaggcg
gcgtcggaggaggtgatcgagaggattatttccgacggggacagcgaggggatgatgagg
aaggcgatgctggagcaggggcgtgggatcgtggcggcggcggtgcaggaaatccaggac
cggcacgacgccgcgaaggaggtggagcggagcctgctggagctccaccaggttttcctg
gacatggcggtgatagtggagacgcagggagagcagatggatgacattgagcatcacgtc
gccagcgccgctcactacgtgaaggacggcaccaaggagctcaagtccgccaaggagtac
cagaggagcagccgcaagtggctctgcatcgccatcatcttccttctcatcctcgtcttg
tttgttgtcatccccatcgccaccagtttcaaacattcttag
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integrated database retrieval system
