Zingiber officinale (ginger): 122035830
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Entry
122035830 CDS
T08725
Name
(RefSeq) alanine--tRNA ligase-like isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122035830
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122035830
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122035830
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
122035830
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122035830
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122035830
Prokaryotic type
122035830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
122035830
NCBI-ProteinID:
XP_042450893
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MADDATPVEWPASKVRETFIRFFESKEHVEWGSSPVVPLDDPTLLFANAGMNQFKPIFLG
TVNPGTPLGRLKRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVEAI
TWAWELLTQVYKLPKDRIYATYFGGDEKLGLPPDTEAQDIWLKFLAPGRVLPFGCKDNFW
EMGDTGPCGPCTEIHFDRLGNRDAASLVNNDDPTCIEIWNLVFIQFNRETDGSLRPLPAK
HVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIRQLTGAQPYSGKIGADDQDKVDMAYR
VVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAQEGFFSGLVGVVVGV
MGDVFPELRQYECKIQEIIAEEEASFGRTLVKGIEKFKKAVLDVQGSKITGQEAFILWDT
YGFPMDLTQLMAEERGLTVDVEGFNIAMEEAREKARSARSKIAGHSIVMDADAISVLHKN
GVGTTDDSYKYIWHQDHESVVKAIYTGTEFLDSALDQVDIGIVLESTSFYAEQGGQIYDT
GSIEGSFGSFHVNNVQVYGGFVLHIGSFAEGAKTLMAGDKVTCKVDYDRRTLIAPNHTCT
HMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVHPEELRKIESIVNQQIKDEIEVY
AGEAALAAAKRINGLRAVFGEIYPDPVRVVSIGHKVDDMLQDADNQEWLSISTEFCGGTH
ISNTRDAKAFALLSEEGIAKGIRRIIAVTTARAFEALDLASSLASEIDEACKSEGSLLEK
KVASLKSKIDAAAIPAAKKADLRADVSQLEVNPTLQKDQRLSCSLNSSSLSAPYQDRVRK
AKRKTAEENIMNAVKTATEVANAASSRGKTFCIVQVDVGLDTSAVREAVLKVLELQGLAA
MAFSTDAESNKAVVCAGVPDNGSKDGLVIEWLNEVMKPLKGKGGGGNNGIAQGQGNDSSR
LEEAMDIASKFASLKLH
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgatgcgactccggtcgagtggccagcgagtaaggtgagggaaaccttcatc
cggttcttcgagagcaaggagcacgtcgagtgggggtcgagccccgtggttccactcgac
gacccgacactcctcttcgccaacgcggggatgaaccagttcaagccgatttttctcggg
accgtgaaccccgggacgccgcttgggcggctcaagcgggcgtgcaacacccagaagtgc
atccgcgccgggggtaagcataacgacctcgacgatgttgggaaggacacgtaccaccat
acgttcttcgagatgctgggaaactggtcctttggtgattactttaaggtcgaggccatc
acttgggcatgggagcttctcactcaggtgtataaactgcctaaagacaggatctatgca
acttattttggtggggatgagaagttaggcctgccaccagatactgaagctcaagatata
tggctaaaatttttggcacctgggcgagtcctgccttttggctgcaaggacaatttctgg
gagatgggtgatactggcccttgtggaccatgcacagaaattcattttgatcgccttggc
aatcgtgatgcggcttcgttagtcaacaatgatgatcctacttgcattgagatatggaat
cttgtatttattcagttcaatagggaaactgatggcagtttaaggcctttacccgccaaa
catgttgatacagggatgggttttgaaagattgacttcaattcttcagaataaaatgagc
aactatgatactgatgtattcttgcccatatttgatgctattcgacaattaacaggggct
cagccttactcgggtaaaattggggcagatgatcaggacaaagttgatatggcgtacaga
gtagttgctgatcacattagaactctttcttttgctattgctgatggttcacgtcctggt
aatgaagggagggaatatgttcttagacgaattctccggagagctgttcgttatggtaga
gaagttttgaaagcacaagaaggattttttagtggtcttgtaggtgttgttgttggagtg
atgggtgatgtattcccagagcttagacaatacgaatgtaagatacaagaaataattgca
gaagaggaagcaagttttggaaggacactagtgaagggaattgagaagtttaagaaggct
gtgctggatgttcaaggcagtaaaataaccgggcaggaggcatttattttgtgggacacc
tacggatttcccatggatttaactcagctgatggcagaagaaagaggactgactgttgat
gttgaaggtttcaatattgctatggaagaagccagggaaaaggctagaagtgctcgcagc
aagatagctggtcattccattgtgatggatgctgatgccatttctgtgttgcataagaat
ggtgtggggacaacagatgatagctacaagtatatatggcaccaggaccatgaaagtgtg
gttaaagctatatacacaggtactgagttcttagactcagcccttgatcaagttgacatt
ggcattgttttggaaagtacaagtttttatgccgagcaagggggtcagatatatgatact
ggatcgattgaaggatcatttggatcatttcacgtaaacaatgttcaagtctatggaggc
tttgtcctccatattggatcttttgcggaaggggctaagacattgatggctggtgataaa
gtaacatgcaaggttgattacgacagacgcaccttgatcgctccaaaccatacatgcact
cacatgcttaattttgctcttcgtgaagtgcttgggaaccatgtcgatcaaaagggttca
atagtgcttcccgagaaattaagatttgatttttcgcacggaaaacccgttcatcccgaa
gagttgagaaaaatcgagtcaattgttaatcagcagataaaagatgagatagaagtatat
gcaggtgaagcagcccttgctgcagcaaaacgtataaacgggttgcgagctgtttttgga
gaaatctatcctgacccggtgagggttgtctccattggccataaagtggatgacatgcta
caagatgctgataatcaagaatggttatccatttccacagaattttgtggagggactcat
atatctaacactcgagatgctaaagcatttgcgcttctgtccgaagagggaattgctaag
ggaatcagaagaattatagctgtcacaactgctcgcgcattcgaggcactagacttggct
tcttctcttgcttctgaaatagatgaagcatgcaaatctgaaggaagtttgctcgagaag
aaagttgcatccctgaaaagtaagatagatgcagctgcgattcccgcagccaaaaaagca
gatctcagagctgatgtttcgcaattggaggtaaatcccacattacaaaaagatcaaaga
ctatcttgttccctaaattcatcctctctttctgcgccttatcaggatcgagttagaaaa
gcaaaaaggaagaccgctgaggaaaacatcatgaacgcggtcaaaacagcaacagaagtt
gcaaatgccgcctcttcaagaggaaaaacattttgtatcgtacaagtcgatgtaggactt
gatacttcagcagtgagggaagctgttctgaaggttttagaactacagggtttagccgca
atggcattcagcactgatgcggaatcaaacaaagctgtggtttgtgccggtgtgcctgac
aatggatcaaaggatggacttgtgattgaatggctaaatgaagttatgaagcccctcaaa
gggaagggaggcggcgggaataacggtatcgcacagggccaggggaacgattcctcccgc
cttgaggaagcaatggacattgcatccaagttcgcttccttgaagctacactga
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