Zingiber officinale (ginger): 122035900
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Entry
122035900 CDS
T08725
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122035900
03036 Chromosome and associated proteins [BR:
zof03036
]
122035900
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122035900
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Helicases
122035900
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122035900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
FlpD
DTHCT
DAGAT
Motif
Other DBs
NCBI-GeneID:
122035900
NCBI-ProteinID:
XP_042450991
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MPSLLLSEPHLTEEMKSKNFKKRKVDEDEEESDTTSDSTVVKRRKLMEEIVEADDPNVLS
NFRISNALREALESKGIKALFPIQAMTFDLILDGFDLVGRARTGQGKTLAFVLPILESLT
NGILKGSRKTGYGRSPSVLVLLPTRELAKQVHSDFEVYGQAVGLSSCCLYGGSPFRAQVM
SIKEGVDIVVGTPGRVKDHIQRNTLDLKTLNFRVLDEADEMLKMGFVNDVELILRKVEDA
KKVQTLLFSATLPDWVKKISARFLKKDKKTADLIGNQKLKASANVRHLVLPCSPSVRQKL
IPYIIDFYSSGGRTIIFTETKKSADKLGSILPGAQALHGDIMQQQREVILAGFRSGKFLV
LVATNVAARGLDISDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGIAILLYEPKNKSRVS
RIEKDSGVKFEHISAPESAGIDESAESLAATAITNVNRFSRGRDGKSFSNGGGRGGRWEG
GRGGGRGRGRGGDRGGSREHGGGRGRGRAGQGGKRFNRRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctcctcttgtccgagccacatctcaccgaggagatgaagagtaagaatttt
aagaagcggaaggtcgatgaggacgaggaggagagtgataccacctccgattccaccgta
gttaagaggcggaagctgatggaggagatcgtggaagcggatgatccgaatgtcttgtcc
aactttaggatctcgaacgccctgagagaggctctggaatcgaaggggataaaggcattg
ttccccatccaggccatgactttcgatctcatactcgatgggtttgacttagtgggcaga
gcacggaccggtcagggtaaaactttggcatttgtgttgcctatattagaatctttgaca
aatggaattctcaagggatcaagaaagactggttatggaagatctcctagtgttttagta
cttcttccgactcgagagcttgctaaacaggtgcactcagactttgaggtctatggtcaa
gcagtggggttatcttcatgctgtttgtatggtgggtctcctttccgtgctcaagtaatg
tcaataaaggaaggtgttgatattgttgttggaactccaggacgtgtaaaggatcacata
cagagaaatactcttgacctaaaaactctaaatttccgtgtcctcgatgaagcagatgaa
atgttgaaaatgggtttcgtgaatgatgtggaactaattctccgtaaagttgaggatgct
aagaaagttcaaactctcctattcagtgctacattacctgactgggtaaagaagatatca
gcaaggttccttaagaaagataagaaaacagcagacctcattggcaatcaaaaactgaag
gctagtgctaatgttaggcatcttgttcttccttgttctccttccgtgagacaaaaactc
attccatatattatcgatttctatagcagtggaggccgaactattattttcaccgagaca
aaaaaatctgcagacaagcttggtagtatcttacctggtgcacaggctttgcatggagac
ataatgcaacaacagcgagaagtcatactagctggatttaggtctggcaagtttttggtt
ttggttgcaacaaatgtggcagctcggggattagacatcagcgatgtgcaattgattata
cagtgtgagcccccacgtgatgtcgaagattacattcatcgctctgggcgaaccggaaga
gctggcaatactggcattgcaatcctactatatgaacccaaaaacaagtcccgtgtttct
cgaatcgaaaaagactccggtgttaaatttgagcacatctctgcacccgagtctgctggt
attgatgaatcagctgaatctttagcagctactgctattacaaacgttaacagattctct
cgtggtagagatgggaaaagcttctccaatggaggtggtcggggtggccgctgggaaggt
ggccggggaggaggtcgaggaagaggacgtggaggtgatcgaggaggcagccgggaacat
ggaggaggtcggggaagaggtcgtgctggccaaggaggcaagagatttaaccgaaggagg
tga
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