Zingiber officinale (ginger): 122035996
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Entry
122035996 CDS
T08725
Name
(RefSeq) coronatine-insensitive protein homolog 1a-like
KO
K13463
coronatine-insensitive protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122035996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122035996
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122035996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122035996
NCBI-ProteinID:
XP_042451096
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MEPKNCQMRLEVPDAALELVLGYMDDPLDREAVSLVCQRWYNIDARSRKQVTIAICYSTS
PDRLRRRFPNLESLKLKGKPRAAMFNLIPEEWGGYAGPWVRGLAESLSCLKSVHFRRMII
EDENIDVLVRARGDKLKSIKIDKCSGFSTNGLMTIARSCKNMTTLFLEESSIVDNNSNDN
RWIRVLALNNCVLEALNFYMTELKVTPQDLELLARNCKSLSSLKISECDISFLIHFFQEA
TLLEEFGGGSFNDQVGEINMYQTVRFPPKLCCVGLMYMGTNEMHLLFPFATSLKKLDLQY
TFLQTEDHCQLIQRCPNLEVLEVRDVIGDRGLEVVAQTCKKLKRLRIERGDDEQGLEDEQ
GRVTQVGLSMLAQGCPELEYLAVYVSDITNAALEALGTFSKNLCDFRLVLLDREKKITDL
PLDNGVRSLLRGCTKLKRFALYLRPGGLSDLGLAYIGEYSGNVRWILMGNVGDSDIGLLR
FSRGCPRLQKLELRSCCFSERALAIAAQQLPSLRYLWVQGYGASQNGASFLSMAHRFWNI
ELIPPSQDTASDEVEDRRGEAQILAYYSLVGRRNDCPESVIPLLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaagaactgccagatgaggcttgaggttccggacgccgcgttggagttagtg
ctgggttacatggacgacccgctcgatagggaggcggtctcgttggtatgccagcggtgg
tacaacatcgacgcccggtcgcggaagcaggtgacgattgccatctgttactccacaagc
cccgatcggctccgccgtaggttccccaacctggagtcgctaaagctcaaaggcaagccc
cgcgctgccatgttcaacctcatcccagaagagtggggtggctatgctggtccgtgggtt
cgtggcctcgccgagtcccttagttgcctcaagtccgtccactttcgccgtatgatcatt
gaggacgagaacattgatgtgctggttagggctagaggggacaagctcaagtcgattaag
attgacaagtgctcaggattctcaacaaacggcctcatgaccattgcccgttcttgcaaa
aacatgacaacattattcttggaagaaagctcaattgttgacaataatagtaatgacaat
agatggattcgagttcttgctcttaacaactgtgtgttggaggcgttgaacttttacatg
acagaactcaaagttacaccgcaagaccttgagctacttgccaggaattgcaaatcatta
tcttctttgaaaatcagtgaatgtgatatctcttttctaatccattttttccaagaagca
acgttactagaagaatttggtgggggatcatttaatgatcaggttggagagatcaacatg
tatcaaacagttagatttcctccaaagctgtgttgcgttggccttatgtatatgggtaca
aatgaaatgcacttattatttccatttgctacttcgctcaagaagctggacttgcagtat
acatttctccagactgaggatcactgtcagctgatccaacgctgtccaaatttagaggtt
ctagaggttagggatgtgattggagatagagggttagaagtcgtggcccagacatgtaag
aaactgaaaagactcagaattgagcgaggtgatgatgaacaaggcctggaggacgagcag
ggtcgagtcacacaagttggtctatccatgctagctcaaggatgtcctgagctagagtac
ttggcagtatatgtctctgatataacaaatgcagcccttgaagctctcggcactttcagc
aaaaacctctgtgatttccggcttgttctgcttgacagagaaaagaaaataacagatcta
ccgcttgataatggtgtccggtctctgctcagaggttgcacaaagctcaagaggtttgct
ctctaccttagacccggtggactgtcggatttaggtcttgcttatattggagagtacagc
ggcaatgtccgctggatactgatgggcaatgttggtgattctgacatcggattgctgagg
ttttcgagaggatgcccgcgcttgcaaaagcttgagctaaggagctgttgtttcagcgag
cgtgctttggctattgcagctcagcaactgccttctttgaggtacttgtgggtgcaaggg
tacggggcatctcagaatggcgctagttttttgtcaatggcacatcggttctggaatata
gaattaattcctccaagccaggatactgcttccgatgaagtggaagataggcgtggagaa
gcgcagatacttgcctactactccctagtcggtcggagaaatgattgcccagaatctgtg
atcccactcctggcatga
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