Zingiber officinale (ginger): 122036068
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Entry
122036068 CDS
T08725
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1-like
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122036068
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122036068
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Helicases
122036068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122036068
NCBI-ProteinID:
XP_042451197
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Position
1A:140720662..140729393
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AA seq
516 aa
AA seq
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MEEISNQRKRVPHLTWMRNPMNIDQFEDGPLSLVPFLDPRLEEVLKKMGIQSLFPVQVAV
WNETIGPGAFERDICVNSPTGSGKTLAYALPIVQTLALRKIRCLRALVVLPTRDLALQVK
DVFAAIASVVGLRVGLAIGQSSIEDERLELIKRPNLGLYSPFDPEDGEMELQTAVDILVA
TPGRLMDHINMTKGFSLEHLCYLVIDETDKLLRDAYQSWLPTVLQLTKSDYQAGRSSNIC
ALHGSLTTLRRCGAERGFKGKVYPRLVKFILSATLTQDPSKISQLYLHHPLLLTSGDKRY
KLPKSLESFKLVCRSKLKPLYLVALLQNLVGEKSIVFTSSVETTHRLSNLLNFFGELPFK
ISEYSRNQHQAMRSKKLKSFKEGKTHVLIATDAMTRGMDVEGIRNVINYDIPAYIKTFIH
RAGRTARAGQSGRCFTFLRQNEIKRFEKMLEKADANSCPSYSLPKDSVENFHPLYLSALE
KLKEHEETRKGKRTSSSFGSAQASKRQKSRTEELKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatctccaaccagaggaagcgcgttccccacctgacatggatgagaaaccca
atgaacatcgaccaatttgaggatggtcctctgagtctcgtcccctttctagatccaaga
ttggaagaggtcctgaagaagatgggtatacaatcactttttccagttcaagtagccgtg
tggaatgagacaattggaccgggtgcatttgaacgcgatatttgtgtaaactctccaaca
gggagtggcaagacacttgcttatgctttaccaattgttcaaacacttgcactgaggaag
ataaggtgcctgcgtgctttagtagttttgcctacacgggacttagccttacaggttaaa
gatgtgtttgctgccatagcatctgtagtgggtttacgtgtaggcttagcaattggccag
tcatcaattgaagatgagagattggaacttatcaagagacctaatcttgggttgtattct
ccttttgatccagaagacggagaaatggagctacagactgcagttgacatattggttgca
acacctggaaggctaatggatcacattaacatgacaaaaggttttagtttagaacatctt
tgttatctggtaattgatgaaacagataagttattacgagatgcatatcaatcctggttg
ccaactgtgcttcagctcaccaaatcagattatcaagctggtcgttcgagcaacatttgt
gctttacatggttcattaactacccttagaagatgtggtgctgaaagagggtttaaaggt
aaagtttatccaaggcttgtgaagtttattctatctgctacactgacccaagatcctagc
aagatttctcagctttatctacatcatcctttattgttgactagcggtgataagcgttac
aaactacctaaaagtctcgagtcattcaagctggtctgcaggtctaaattgaagccactc
tatttggttgctctattgcaaaatttggtaggagagaagtccatagtttttacatcatct
gtggagacaactcacaggctaagcaatttattgaatttctttggtgaattgccatttaaa
attagtgaatattcacgtaatcagcatcaggccatgcgaagcaagaaactgaagtccttc
aaagaaggaaaaacacacgtgctaattgcaaccgatgcaatgacgcgtggaatggatgtt
gaaggaattagaaatgttataaattatgatatccctgcttatattaagacatttatccat
cgagcaggtcgaactgcaagagcaggtcaatcagggcgttgctttacattcctgagacaa
aatgagatcaagcgatttgaaaagatgcttgagaaggctgatgccaattcttgtccatct
tactctttacctaaagattctgtggaaaacttccatccactgtacttatctgccctggag
aagctgaaggagcatgaggaaacaagaaaaggaaagagaaccagtagcagttttggatca
gctcaagcaagtaagagacagaagtcaagaacagaagaactgaaggaatag
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