Zingiber officinale (ginger): 122036073
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Entry
122036073 CDS
T08725
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122036073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122036073
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122036073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
122036073
NCBI-ProteinID:
XP_042451201
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MRPLASVFRSVKNCRRNRTSAADHHGKSTPESRHHSRNGGGGARLKRGRKAGDWEVYLIV
SSRLPKTYVGVTTDFSRRLKQHNGILKGGAKACSGGRPWSLACIIRGFKDRSEACEFESR
WKIASRKMPRKKKELCAANPVLEHRQTALDHVRRWFDWSSLQIEWKANSS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccctcgcgagcgtgttccgatccgtcaaaaattgtcgccggaatagaacatct
gcggcggatcatcatggaaaaagcacgccggagtcccgacaccacagccggaacggaggt
ggaggagcacgactcaagcgtggcaggaaggctggagattgggaagtctatctcatcgtc
tcatcccgattgcctaagacttacgtcggcgtcaccaccgacttctcgcgtcgactgaag
caacacaatggcatattaaaaggtggagcaaaagcatgctctggtggaaggccttggagt
cttgcatgtattattcgaggattcaaggatcgaagtgaagcttgtgaattcgagtcaagg
tggaagattgcctcgcggaaaatgccaaggaagaaaaaggaattgtgtgctgcaaatcca
gtattggaacatcgccaaacggctttagaccatgttcgtagatggttcgactggagtagc
ttgcaaatagaatggaaagccaactcatcttaa
DBGET
integrated database retrieval system
