Zingiber officinale (ginger): 122036203
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Entry
122036203 CDS
T08725
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122036203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122036203
03036 Chromosome and associated proteins [BR:
zof03036
]
122036203
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19-related factors
122036203
Complex C
122036203
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122036203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_17
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
122036203
NCBI-ProteinID:
XP_042451395
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MASGSLGLQLPRSTRVKNKTAAAIQITAEQILREARERQEPEIRPPKQSITDSDDLADYR
LRRRKGFEDVIRRARWKTGTWVAYAAWEESQGDIARARSIWERVLEVDYRNPTLWLQAAA
FEMRIRCINHARNIWDRAVALLPRVDQLWYKYAHMEEILGNVAGARLIFERWMDWQPDTQ
GWLSYINFELRYNEVDRARAIYERFVVCHPRPSSFIKYAKFEAKRGEIARARAVYERAVD
LLSEDEEAGQLFVAFAGFELWCKEMERARCIYRYALDHLPKGRADDVHKEYVTFEKQYGD
THGIEDAILRQMRLKYDDEVRKNPFNYDSWFDYIRLEENGGNKDMVREVYERAIANVPPA
EEKRYWKRYIYLWINYSLYEELDAQDMDRTREVYRECLKLIPHKKFSFAKIWLMAAQFEI
RQRNLKAARQILGNAIGMAPSDKIFKSYIEIELHLGNVNRCRILYEKYLEWAPANCYAWL
KYTEFERTLNETERARALFELAIAQPALDMPELLWKAYIDFEIPTEFEKTRQLYDRLLDR
TKHLKVWLSYAKFEASAGIEDKTMDNEVQEKNHDIEEKQRKRIERCRGVFERAFDYFRTN
VPELKEERAMLLEEWLNLESSFGSLGDISILQNKLPRKVKRKRPISSEDGTPTTGFEECM
DYIFPDEVALAPNMKLLEAAYKWKKQKIATDEN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggatccctaggcctccagctgccgcgttccacccgcgtgaagaacaagacg
gcagcggcgatccagatcaccgccgagcagatactgcgcgaggcccgcgagcggcaggag
cctgagatccggccgccgaagcagagcattaccgactccgacgacctagccgactaccgg
ctccgcaggaggaaaggtttcgaagatgtaatccggcgcgctcgctggaaaactggtact
tgggtcgcatatgccgcctgggaagagtcacagggagacatcgctcgcgctcgatccatc
tgggagcgggttctagaagtcgactatcgcaaccctaccctgtggctccaggccgccgca
ttcgagatgcgaattcgctgtatcaatcatgctcgcaatatatgggaccgcgccgtcgcc
ctccttccccgcgtcgaccaactttggtacaagtacgcgcacatggaagagatccttggc
aatgttgcaggtgcacgtctgatatttgaacgctggatggattggcagcccgacactcag
ggctggctttcgtacattaactttgagcttcgctacaatgaggtcgatcgtgcgcgtgct
atctacgaacggtttgttgtttgccaccctcgtccttcttctttcatcaagtatgccaag
ttcgaggccaagcgcggtgaaattgctcgtgcccgtgcggtgtatgagcgcgccgtcgat
cttctttctgaagacgaggaagcagggcagctcttcgttgcctttgcaggcttcgagctc
tggtgcaaggagatggaacgagctcgttgcatataccgttacgcgctagaccacctcccc
aaggggagggccgacgatgttcataaggaatatgttacttttgagaagcagtatggagac
acgcatggaattgaagatgctattctcagacaaatgagattaaagtatgatgacgaggtg
aggaagaaccctttcaattatgactcctggtttgattacataaggctggaggagaatggt
ggaaacaaggatatggtgagggaggtgtatgaaagagcaatagccaatgtgcctccagca
gaggagaagcggtattggaaaagatatatctacttgtggataaactattcattatatgaa
gaactggatgcgcaagacatggatagaacgagggaggtttacagggaatgtttgaagcta
attcctcataagaagttttcctttgcaaagatatggctcatggctgcccaatttgaaatc
agacaaaggaacttaaaggctgcacgccaaatcttaggaaatgccattggaatggcgccg
agcgataagatatttaagagctacattgaaattgaactccatctaggcaatgtaaatcgc
tgcagaatcctgtatgagaaatatctggaatgggcccctgcaaactgctacgcatggttg
aaatacactgagtttgagagaacattgaatgaaacagagcgtgctcgagcattgtttgag
cttgcaattgctcaacctgcactggacatgccagagttgctctggaaggcatatattgac
tttgagatacccacagaatttgaaaaaacaagacagctctatgatagactacttgatcgg
accaaacacttgaaggtctggcttagttatgctaagtttgaggcttctgctggcatagaa
gacaaaactatggacaatgaggttcaggagaagaaccatgatattgaagagaaacaaagg
aagagaattgaacgatgcagaggggttttcgagagggcatttgactacttcagaacgaat
gtgccagagttaaaggaggaaagagcaatgcttttggaggagtggttgaacttggagagc
agttttggtagtctcggggacattagcatactacagaataaattgccaaggaaggtgaaa
aggaagagacctatttcatcagaagatggaactcccactactgggtttgaggagtgcatg
gactacatcttccctgacgaagtagctttagcgcctaatatgaagctactagaagcagcg
tacaaatggaaaaagcagaaaatcgccacagatgaaaattga
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integrated database retrieval system
