Zingiber officinale (ginger): 122036263
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Entry
122036263 CDS
T08725
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122036263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122036263
03029 Mitochondrial biogenesis [BR:
zof03029
]
122036263
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122036263
Others
Specific organelles associated proteins
Auto phagosome
122036263
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122036263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
ATG16
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_HPS5
NBCH_WD40
PROPPIN
WDR54
PQQ_2
PEP5_VPS11_N
Beta-prop_Vps41
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122036263
NCBI-ProteinID:
XP_042451470
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MLRFSDMTSEEIGKAAIRCAIQALRKRHLAEEGAHAPAINALSRPLVAQGLEWKEKAEKL
ELELQQYYKAHTRLSDQLVTEIAECREAKALVQEKEELLTNLQIEMSQTREENLQLSHDL
EEKTKALDLLISENQSIKAQLEEIRIKLIKTESENKELIDRWMLEKMNSAEKLNEVNAMY
DYVMQQFKMSSIEQLAKQQVDGVVRQREAGYVDHVESTIPSYCKHTIQSHEGGCAAILFQ
NNSDKLISGGQDRTVKIWDSNSGTLVSTLHGCLGSILDLAVTHDNRSIIAASSSNNLYVW
EASSGRVRHTLTGHTEKVCTVDASKVSNRNLVSAAYDHTIKVWDLMKGYCTNTIISQSNC
NALSYSLDGLTFCSGHVDGNLRIWDSRMGKTISEVAAHSQAVTSVCVSQSGNLVLTSGRD
NLHNLFDLRTLEVCGTFRASGNRVASNWSRSCISADENCIAAGSADGSVHIWSRVKVKDN
GLSILEGHSSPVVSCSWSGLGKALASADKNGNLCIWC
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcttagattcagtgacatgacttcagaggagattgggaaggctgctattaggtgtgcc
atccaagcccttcgtaaacggcacttggctgaggaaggcgcccatgctccagctatcaat
gcactctccagacccctcgtggcacagggcttggagtggaaggagaaagctgaaaagctt
gaactagaactgcaacaatattacaaagctcatacacgattgtccgatcaacttgtcact
gaaattgcagaatgcagggaagcaaaagcccttgttcaagagaaagaagaattgctcacc
aatttgcaaattgagatgtcacaaacaagggaagaaaacctacaacttagtcatgattta
gaggaaaagacaaaagcattggatttgttaattagtgaaaatcagtcgattaaggcacaa
cttgaggagattagaataaagctgataaaaacagagtcagagaacaaggaattaattgat
agatggatgctagagaaaatgaattctgcagaaaagctgaatgaggttaatgcaatgtat
gactacgtgatgcaacaattcaagatgtccagcatcgaacaacttgccaaacaacaagtc
gacggagtagttcgccaaagggaagcaggatatgtagatcatgtcgagtcaacaattccg
tcttactgcaagcacaccatccagagtcatgaaggtgggtgcgctgccattttgtttcaa
aacaattccgataagttgatcagtggtggtcaggatcgaacagttaagatctgggatagc
aactctggaaccctagtgtccactctccatggctgccttgggtcaatacttgaccttgct
gttacacacgacaaccgatccatcattgcagcaagcagttcaaataacctttatgtgtgg
gaagccagctctggtcgggtacgccacacactgactggccacaccgagaaagtttgcact
gtcgatgctagcaaagtctctaaccgcaatttagtcagtgctgcctatgatcataccatc
aaagtgtgggacctaatgaaaggttactgcactaacaccatcatctcccagagcaactgc
aacgcactttcctatagcttggacgggctcaccttctgctccggtcatgtggacggaaac
cttcggatatgggacagccggatggggaaaacgataagtgaagtagctgcacattctcag
gcagtcacatcagtttgtgtatcacaaagtggtaacctggtgctgactagtgggagggac
aacctgcacaatttattcgacctgagaacattagaagtgtgtgggacattcagagccagc
gggaacagagtggcatcgaactggagcagatcatgtatcagcgccgacgagaactgcatt
gcggctgggtcagctgatggatcagtccacatatggtcgagggtaaaggtaaaggacaat
ggtctgagcattttggaagggcattcgtcgccggttgtgtcatgttcgtggagtgggctg
ggaaaggctttggcttctgctgataagaatgggaatttatgcatatggtgttga
DBGET
integrated database retrieval system
