Zingiber officinale (ginger): 122036393
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Entry
122036393 CDS
T08725
Name
(RefSeq) cysteine desulfurase 1, chloroplastic-like
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00450
Selenocompound metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122036393
Enzymes [BR:
zof01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
122036393
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
122036393
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
122036393
NCBI-ProteinID:
XP_042451622
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAASLCHFPPAVSSSSSLFVGSKSRSLLLAVSPFKHFPSKSSISASLPWTRSYAVSNDAA
AFSVASPSDLRESPSLGEITRPDFPILRQVVNGFNLVYFDNAATSQKPSSVIKALSEYYE
LYNSNVHRGVHYLSAKATDAYEEARNKVANFVNAADRREIIFTRNATEAINLVAYSWGAL
NLRPGDEIVLTIAEHHSSIVPWQIVAKKTGAVLKYVELTKEVPDLDQFKGLLSKNTKLVV
AHHVSNVLGSVLPIDEIVDWSHKVGAKVLVDACQSVPHMVVDVQKLNVDFLVASSHKMCG
PTGAGFLYGKINLLSSMPPFLGGGEMITDVFQDYSTYAEPPSRFEAGTPAIAEAIGLGAA
IDYLSSIGMEKIHNYEKKLSEYLYYQLSSVPNIHIYGPAPSDTVHRAALCAFNVDNIHPT
DIATFLDEQHGVAVRSGHHCAQPLHRALGVNASARASLYFYNTKEEVDTFIQALKDTIEF
FTTAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcgctctgccacttccctcctgccgtctcctcctcctcctctctcttcgtc
ggatccaaatcccgatcccttctccttgccgtctcccccttcaagcactttccgtcgaag
tccagtatctccgcctccctcccgtggaccaggagctatgccgtctccaacgatgccgcc
gccttctcggtcgcctccccgtccgatctgagggaatcgccttctctgggggaaatcact
cgcccagacttccccatccttcgccaggtggttaatggattcaacctggtttattttgac
aatgctgcgacatctcagaagccttcatctgttatcaaggccttgagtgaatactatgaa
ttgtataattcaaatgttcaccgtggcgtacactatttgagtgcaaaggcaacggatgcc
tatgaagaagcgagaaacaaagttgccaattttgtcaatgcagcagatcgaagagagatc
atattcactcgcaatgctacagaagctatcaatttagtagcctattcatggggtgcatta
aacttaaggcctggggatgagatagtactcacaatagctgagcatcatagttctatcgtt
ccttggcaaattgtcgctaaaaagacaggcgctgttctgaagtatgttgaattgacaaaa
gaagtccctgaccttgatcaattcaagggactcctttcaaagaacacaaagcttgtagtt
gcacatcatgtctctaatgtactaggttctgttcttccaattgatgagatcgtagactgg
tcacataaggttggtgcgaaagttctcgtcgatgcttgtcagagtgttcctcacatggta
gtagatgtacagaaacttaatgttgattttctggttgcctcatcacataagatgtgtggg
cctacaggcgctggtttcttgtatggtaaaattaatctcttgtcgtcaatgcctccattt
ttaggtggtggtgaaatgataactgatgtgtttcaagattattcaacctatgccgagcca
ccttccagatttgaagctggaactcctgctattgcagaagctattggtttgggggcagca
attgattatttgtcgagcattggaatggaaaagatccataattatgagaaaaaactgtca
gaatatctatactatcaacttagtagtgtacccaacattcacatctatggtcctgctcct
tcagatacagttcatcgagctgctctttgcgcatttaatgttgataacatccatccaacg
gatatcgcgacattccttgatgaacagcatggagtggctgttcgttcaggacaccattgt
gctcagcctctacaccgagccttaggtgtcaatgcgagtgcgcgggctagtctttacttt
tataacacaaaagaagaagtggacaccttcattcaagcacttaaagatactatcgagttt
ttcaccactgctgcgtaa
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