Zingiber officinale (ginger): 122036474
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Entry
122036474 CDS
T08725
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122036474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122036474
Membrane trafficking [BR:
zof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122036474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DASH_Dad4
Sec20
Motif
Other DBs
NCBI-GeneID:
122036474
NCBI-ProteinID:
XP_042451731
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MVLVSLVRDYIGRMLQDIPGMKVLVLDSQTVSIVSVAYSQSELLKKEVFLVELVDSMSKE
TMAHLKAVYFLRPTTENIQKLRRQLVKPRFGEYHLFFSNILKITQIQVLADSDEQEIVHQ
VQEFFADFCAIDPYHFTFNMPMNHIYMLPTVVDPPTFQSFCDRAVDGIAGVFLALKRRPV
IRYQRTSDIAKRIAQESAKLMYEQETSLFDFRRTEFSPLLLVIDRRDDPVTPLLNQWTYQ
AMVHELIGIEDNKVDLTNVGKVANEQQEVVLSSEQDSFFKANMYENFGDLGMNIKTMVDE
FQQIAKSNQNIQTIEDMSKFVNNYPEYRKMQGNVSKHVTLVTEMSRIVQERKLMIVSQTE
QELACNSGQAAAFETVTNLLNNEDISDIDRLRLVMLYALRYEKESPVQLMQLFNKLASHS
AKYKPGLVQFLLKQAGVDKRIGDLYGNRDLLSIARNMARGIKGVENVYTQHQPLLFQTME
NIIKGRLKDVDYPFIGNHFQQGRPQDVVIFIVGGTTYEEARAVALHNASNPGTRFILGGS
VVLNSKRFLRDLEEAQTISRTSHAV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgtctctctggttcgtgactacatcggccgaatgctgcaggacatccctgga
atgaaggtcctcgtcctcgattcccagacggtcagcattgtaagtgttgcctatagccaa
tcagaactactcaaaaaggaggtgtttttagtggaacttgttgattcaatgtcaaaggaa
acaatggcccacctaaaagcagtttactttcttcgcccgacaaccgagaatattcagaaa
ttacgacgtcaattggtcaaacccagatttggagaatatcacttgtttttctccaacatt
ttgaaaatcacccaaattcaagtgctcgctgactctgatgagcaagaaattgtccaccaa
gttcaagagttctttgctgacttttgtgccatagatccttaccatttcacttttaacatg
ccaatgaatcacatatacatgctgccaactgttgtggatcctccaacttttcaaagtttc
tgtgatcgagccgtggatggtattgctggagttttcttagcactcaagcgacgccctgtt
atacggtatcagagaacatctgatatcgccaagagaatagcacaagaaagtgcaaagctt
atgtatgagcaagaaactagtttgtttgatttcagacgtacagaattctcccctttgttg
cttgtaattgataggagggatgatcctgttacacctctgctgaaccaatggacttatcaa
gcaatggttcatgagttgattggaattgaagataataaagtagatctgacgaatgttggt
aaagttgccaatgaacaacaggaggtggtgctctcatcagaacaagatagcttttttaaa
gctaacatgtatgagaattttggagatctcggaatgaatattaagacaatggtggatgag
ttccagcagattgcaaagagtaatcagaatattcagacaatagaggatatgtcaaaattt
gtaaacaactaccctgagtatcgaaaaatgcagggcaatgtttcaaagcatgtaacattg
gttacagaaatgagtagaattgttcaagagcgaaagctcatgattgtttcacaaacggaa
caagagcttgcatgtaacagtggacaagcagcagcatttgagactgtcaccaatcttctg
aataatgaagatatttctgatattgatcgtttgcgactagtaatgttgtatgccttgcga
tatgagaaagagagtccagttcagttgatgcagctctttaacaaattagcttctcactct
gcaaaatataagcctgggcttgttcaattcctcctaaagcaggcaggggttgataagcga
attggagatctctacgggaatcgtgatctgttgagcattgctcgtaacatggctcgtggg
attaagggtgttgagaatgtgtacacacaacaccagccacttctgtttcaaactatggaa
aacatcatcaaaggacgactgaaagatgttgattatccatttatcggcaatcacttccag
caagggagacctcaagatgtagttattttcattgttggaggcacgacatatgaggaggca
cgcgctgttgccctacacaatgcttcgaaccctggaacacgtttcatacttggaggctcg
gttgtcctcaactccaagaggttcctaagagacctggaagaggcacaaacgatatcacgc
acgagtcatgctgtctga
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