KEGG   Zingiber officinale (ginger): 122036535
Entry
122036535         CDS       T08725                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122036535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122036535
   03041 Spliceosome [BR:zof03041]
    122036535
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122036535
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122036535
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122036535
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 122036535
NCBI-ProteinID: XP_042451822
LinkDB
Position
1A:141992487..141999892
AA seq 435 aa
MDPSSKKRKADENGNLATTIPLADLSHDDGRKIIDAFSLEQLRDIVAAAVCRGEPGVLAD
VRTIADRDQSQRKLFIRGLGLDTTTDVVRSLFSAYGEIEEAAVIVDRVSGKSRGYGFITF
RHVDGALLALKEPSKKIDGRMTVTQLASAGNTGSGAATSVDVSLRKIYVANVPVEMPSDR
LLAHFSQYGEIEEGPLGFDKMTGKFKGFALFVYKTADGARNSLLEPNKNVDGHNLVCKLA
IEGKKGKPGASAPGVAAVGGMPGQPLGTGADVGPDGLGSGVQSSLTSQYGGTGGRYGSYT
GYSGSALPVAAGLSLPHNLNSSLPTSIGAVVPGLSVGNQMPSSHGSGGYGGGLGGPLGSS
SQYGAPGSGGYGGYGIGSYRVPPNSGGTPSGGYPDGGLYNLSSSAYQNQNQQPTGSSPGQ
RHPGGGVYPNAPHYY
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggatccttcctccaagaagcgcaaggccgacgagaacggcaacctcgctaccacaatc
cctctagcggatctctctcacgacgacggccgtaagatcatcgacgccttctctctagaa
cagctccgtgacatcgtcgctgccgctgtgtgccgtggtgaacccggggtccttgccgat
gtgcgcacaatcgccgaccgcgaccaaagccagcgcaaactcttcatccgcggcctcggc
ctggataccaccactgacgttgtccgctccctcttctccgcctacggcgagatcgaggag
gccgctgtcatagtcgatagagtcagtgggaagagcaggggctatggattcatcaccttc
cgtcacgtcgacggtgctcttctcgccctcaaggagccctcgaagaaaattgacggccga
atgaccgtcacccagctcgcttctgctgggaacacgggatccggtgccgctacttctgtt
gacgtctctcttcgcaagatctacgtggcgaacgttcctgttgaaatgccctcggatcgc
ttgctcgctcatttttcccaatatggagagatcgaggaggggccattagggtttgacaag
atgactgggaaattcaagggctttgctctttttgtttacaagacggcagatggagcaagg
aattctcttttggagcctaacaaaaacgttgatgggcataacttggtctgcaagctcgct
attgaggggaagaaagggaaaccaggtgcctcagccccaggtgttgcagctgttggtggg
atgccaggccagcctttgggtactggtgctgacgttggtccggatgggcttggatcgggt
gtgcaaagttcgctcacaagccaatatggtggcactggtggccgttatggttcatatact
gggtactctggtagtgcgctgcctgttgctgctggactgagtctccctcataatttgaac
tcatctttgccaacatcgatcggtgcagttgttccagggctgtcagttggaaatcagatg
ccttcctcgcatggaagtggaggttatggtggaggtttgggtggtcctcttgggtcatct
tctcagtatggtgctcctggctctggtggttatggaggttatggtataggttcatatcgt
gtgccaccaaactctggcggaacaccttcaggtggttatcctgatggtggactctataac
ctatcatcatcagcataccagaaccagaatcagcagccaacaggttcatctcctgggcag
aggcatcctggtggaggggtttatccaaatgccccacattactattaa

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