Zingiber officinale (ginger): 122036803
Help
Entry
122036803 CDS
T08725
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122036803
Transcription machinery [BR:
zof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
122036803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_5
THP2
GerE
Motif
Other DBs
NCBI-GeneID:
122036803
NCBI-ProteinID:
XP_042452155
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MGIVAVPSSASRSAFGACGLAVRRSPALRRPFVVLAFKGGPGPNYSEAVVSPPVKETKKS
PGKRPERGKSAAVSADACTRDPGYDEVAAALENIYKLSPEDFTDWEAKGVGNVVRNKKKA
KRLGLEERVSLRQQRKEEESVEEANSGRKRRDLKEDEEKLVREYSISTDLNRLDWKRVKI
PPVLSSVEHTWLFKSMQPMKAILQVKEELSKDLKRESTYGELADAVNTSVPILRRHLEVG
QAARNKLIKHNLRLVLFVINKYFPETATGHKFQEFCQAGARGLITAIDRFEPRRGFRLST
YGLFWIRHSISRSMTLASFTKVPFGIESVRQEIQKGKLELSFELGRQPTEKETADRVRIS
LERYNDVVKTSRPVFSLHAKHIVTQEEFINGITDIDGSVGGDKHRQPALLRLALDDVLDS
LKPKESLVLRQRYGLDGKGERTLGEIAGNLNISREMVRKHELKALLKLKHPTRVDYLRRY
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgtcgctgtccccagctctgcctcccgatcggcgtttggcgcctgtgggctc
gcggtccgtcgctcgccggcgctacgtcgaccattcgtcgtcttggccttcaaaggaggc
cccggccccaactactccgaggccgtcgtttcccctcccgtgaaggaaacgaagaagagt
cccgggaaacggcccgagagaggtaagagcgccgccgtctccgccgatgcttgtacacgc
gatccgggctacgacgaggtcgccgccgcgctcgagaacatctacaagctgagcccggag
gatttcacggactgggaggcgaagggggtggggaatgtggtgaggaacaagaagaaggcg
aaaaggttaggacttgaggaaagagtgagtttgaggcagcagagaaaggaggaggagagc
gtggaggaggcgaatagcggccggaagaggagggatttgaaggaggatgaggagaaatta
gtgagggagtactccatttccaccgatttgaacagattggattggaagagggtgaagata
ccaccagttcttagctcggttgagcatacatggcttttcaagtcgatgcaacccatgaag
gcaatccttcaagtgaaggaggagttatctaaggatctgaagagggaatcaacttatggc
gagcttgcagatgcagttaacacgagtgtgccaatattaagaaggcatttagaagttggc
caagcagcaaggaacaagctaatcaagcacaacctcaggctggttttattcgtaatcaac
aagtattttccagagactgcaaccggacataagttccaagaattttgtcaagctggagcc
agaggtctcatcactgccattgatcggtttgagcccaggcgcggcttccgtctgtccaca
tacggcctcttttggatccgacattccattagccgatcaatgacccttgcaagcttcaca
aaagttcctttcgggattgagtcggtcagacaagaaatccagaagggtaaactggaacta
tcttttgagctgggaagacaacctactgaaaaagagacagccgatcgagtaagaatttca
ctggaaagatacaatgatgtggtgaagacatcaaggccagtgttttctctccatgcgaag
catatcgtaacgcaagaagaattcatcaatggcattactgatatagatggatcagttgga
ggcgataagcatagacaacctgcacttttacgactagctcttgacgacgtgctggattca
cttaaaccaaaggagagcttggtgctccgacaaagatatggactcgacggcaagggagaa
agaaccttaggagagattgcagggaatctcaatatatcgagagagatggtcaggaagcat
gagctgaaggcactcctgaagctgaagcatccgactcgagtcgactaccttcgtcgatac
atctga
DBGET
integrated database retrieval system
