Zingiber officinale (ginger): 122036858
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Entry
122036858 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122036858
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122036858
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122036858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
DNA_ligase_ZBD
zf-C3HC4_3
DUF4153
zf-RING_16
Tmpp129
Sterol-sensing
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122036858
NCBI-ProteinID:
XP_042452217
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MGTSRGAGCVIKSLWLLVAARCALAQAPPPSTPSDKYNPYFGSPTFNPTMAIVIVFLVTA
FFFVILLSIYIRRCAGGSFDDPGGPGRPRRLLSRLQQNRGLSADVIETFPTLLYADVKGL
KLGKGALECAVCLCEFDDDDALRLLPPCSHAFHPECIDAWLASHVTCPVCRSNLAEESGG
ATIYLLDSPPSIDPPASLEPPVSPLPPDQVAVVVDPKTGSEPMASLTERQRRDVGSRSWR
LRPPKLLRSYSTGHSVTLPGENVDRYTLRLPDHIRREIFATPNNLHFPTSRLELTDEGTS
HRVVGGSTIDDARNRAGRGVRFGRSDRWPSFFIRTLSAKFPARATPRRADGGEAPARKWE
AEGTSSGKFEGPTRAPFNCPSPPGNDAKPADDQD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggggacgagtcgcggtgcaggctgtgtgattaagagtctgtggcttctggtcgccgcc
aggtgcgctttggcgcaggcgccgcctccctcgacgccgtcggataagtataacccctac
ttcggctcgccgaccttcaaccccaccatggccatcgtcatcgtgttcctcgtcacggcc
ttcttcttcgtcatcctcctctctatctacatccgccgctgcgccggcggcagcttcgac
gaccctggcggccccggccggccgcggcggctgctgtcgcggctgcagcagaacaggggg
ctcagcgctgacgtcatcgagacgtttccgacgctgctttacgccgatgtgaaggggctc
aagctgggcaagggcgcgctggagtgcgcggtgtgcctctgcgagttcgacgacgacgac
gcgctccgcctcctgccgccctgtagccacgccttccaccccgagtgcatcgacgcctgg
ctggcctcccacgtcacctgccccgtctgccgctccaacctggccgaagaatccggcggt
gccaccatctaccttttggattcgcccccttccatcgacccccctgcgtccctcgaaccc
cctgtttctccgctgccgccggatcaagtggccgtcgtcgtcgatccgaagacgggttca
gagccgatggcctcgctgacggagagacagaggagggatgtaggttcgcggtcgtggaga
ctgcggccgccgaagctactacgctcatactccaccgggcactccgtgacacttcccggg
gagaacgtcgaccgctacaccctccggcttccggatcatattcgaagggagatctttgcc
acccccaacaacctccattttccgacgagccgcctcgagctcacggacgaaggcacctcc
caccgcgtcgtcggcggatcaacaatagacgacgcgagaaaccgcgccgggaggggcgta
cgtttcggaaggtcagaccgttggccttcgttcttcatccgcacgttgtcggcgaagttt
ccggcgcgggccacgcccaggagagcggacggcggcgaggcgccggcgagaaagtgggag
gcagaggggacatcaagcggcaaattcgagggacccacgagggctccattcaactgcccc
agccctccaggcaacgatgcaaagccggcggacgaccaggactag
DBGET
integrated database retrieval system
