Zingiber officinale (ginger): 122036872
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Entry
122036872 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-like
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122036872
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122036872
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122036872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_UBOX
zf-CCCH_9
IBR_1
Motif
Other DBs
NCBI-GeneID:
122036872
NCBI-ProteinID:
XP_042452236
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MRRTLCKFFMHGACLKGDHCEFSHDWQDQANNICTFYQKGVCSYGSRCRYDHVKVSRTHS
SGPSFSLSPNSHPRSSSGSHQVTHTSEVPSAREHVLEPSKSIDVSTMNLIHKLPSTSVWT
SNFETVTSSNDELGDHPTYLTDSDRPICSFAAAGRCPYGQSCPRLHGDLCTICGKHCLHP
FRPDEREEHIKMCQKNNKHLEALKYSQEIECSVCLDRVHSKPNPAERKFGLLSECDHPFC
ISCIRNWRGNSPASGMDINSALRACPICRKLSYFVIPSIIWYSTKEEKQEIVDNYKAKLK
SIDCKYFDFGNGTCPFGTSCFYKHAYRDGRLEEVVLRHLDAEDGNTVIAKDIRLSDFFSG
LRL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggactttgtgcaagttttttatgcatggagcttgcttgaagggggatcactgt
gagttttcccatgattggcaagatcaagccaacaatatatgcaccttttaccagaaaggt
gtctgctcttatggtagtcgttgcagatatgaccatgtaaaagtttcccgtacccattca
tcaggtccatcattctccttatcaccaaactctcatcctcgctcatcatcgggttctcat
caagtcactcacacttctgaagttccttcagcaagagaacatgttttggaaccaagcaaa
tccatagatgtgtcaacaatgaatttgatccacaaacttccttctacatctgtatggaca
agtaattttgaaactgttacttcttcgaatgatgagcttggagaccatcctacctattta
acagattctgaccgccccatctgctcgtttgctgccgctggtagatgtccttatggacaa
agttgccctcgcctccatggtgatttatgcaccatttgtggaaaacattgcttgcatcca
ttccgtcctgatgaaagagaggaacatataaagatgtgtcaaaagaataacaagcacctt
gaagccctgaaatacagtcaagaaatagagtgcagcgtttgtcttgaccgagtacactct
aaacccaatccagctgagaggaaatttgggttgctttcggagtgtgaccatccattttgt
atctcatgtattcgcaattggcgtggcaattctccagcatctggcatggatatcaactct
gcattaagggcttgtcctatatgccgaaagctatcatactttgtcatccctagtatcatc
tggtattctacaaaggaggaaaagcaggagatcgttgacaactacaaagccaaactcaaa
tcaattgattgcaaatattttgactttggaaatggcacatgcccttttggaactagctgc
ttctacaagcatgcatatagagatggtcgtttggaagaagtcgtactacgccatctagat
gctgaagatggaaacacggtcattgccaaagatataaggctttccgatttcttcagcgga
ctgcgtctgtag
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