Zingiber officinale (ginger): 122036902
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Entry
122036902 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1A-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122036902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122036902
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122036902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF6556
Motif
Other DBs
NCBI-GeneID:
122036902
NCBI-ProteinID:
XP_042452268
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MERENSAIDREEHDVDFLFGGSTDGDSDAGGGSDNGEEEEGVERSGSIFSQQWPKSYRES
VDSYTISASPAFGYLGPLRSLRLSSSLSQSGQDSELKLPLLSSGISEKQESHESMRKSLD
LASNKSVSFSFSGEGYAHHGCSVTQTVFNGVNVLAGVGLLSTPFTVKEAGWASLVMLVVF
SAVCCYTGILMKHCFESKDGIFSYPDIGEAAFGRFGRLFVSVVLYAELYAYCVEFIILEG
DNLTNIFPGTTLDWAGIHVDSIHLFGILTALIVLPTVCLRDLRVISYLSAGGVVATLLIF
VSVITVGFTDGIGFHHSGKAVIWGGLPFAIGVHGFCYSGHSVFPNIYQSMSDRTKFTRAL
LISFTLVTLIYGLLAAIGYLMFGEGTLSQITLNLPKNSFASTIAIWTTVINPFTKYALLL
NPIARCLEELLPQETADKLWCSMMLRTTLVISTVCVAFLLPFFGLVMALIGSLLSILVAI
IMPALCFLKISRNKASLIQVVLSFATVAMGTVCAIIGTYSSLSKLSSNY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagaactcggcgatcgacagggaggagcatgacgtggacttcctcttcggc
ggaagcaccgacggcgacagcgatgcggggggcgggtcggacaatggagaagaggaggag
ggcgtggagcggtcaggtagcatattctctcagcagtggccaaaaagctatagggaaagt
gttgattcatacacaatttcggcatcaccagccttcggttatcttgggcctttgcgtagt
cttagactatctagctcccttagtcaaagtggacaagattctgaattgaaattgcctctt
ctgtccagtggcataagtgagaagcaagaatcacatgaaagcatgaggaaatctcttgat
ttggcatcaaataagtcagtatcgttttcattttctggtgaaggatatgctcatcatgga
tgtagtgtaactcaaacagtctttaatggagttaatgtattggcaggagttggtcttctt
tctactccatttactgtgaaagaggcaggatgggccagtttggtaatgctagttgtattt
tctgcggtttgttgctacactggcattcttatgaagcattgttttgagagcaaagatggc
atatttagctatccagatattggtgaagctgcatttggaagatttggacgcctttttgta
tctgttgttttatatgcagaactatatgcatactgtgtagaatttattattttagaaggt
gataaccttacaaatatctttcctgggactactttggattgggcagggattcatgttgat
tctattcatttgtttgggatacttactgctctaattgtcctaccgactgtctgtttacga
gaccttagagtaatctcttatctttcagctggtggagtggtggccaccttgttgatcttt
gtctctgtaattaccgtgggttttactgatggaattggtttccatcattctggtaaagct
gtgatttggggtggccttccatttgctattggtgtgcatggtttttgttattctgggcac
tccgtgtttccaaatatttaccagtcaatgtcagatcgaacaaaattcacaagagcattg
ttaataagttttactctggttacattgatttatggtttgcttgctgccattggatatctc
atgtttggcgaaggcacattgtcccaaataacattgaacttaccaaagaattcatttgcc
tcaacaattgcaatatggacaacggtcatcaatccattcaccaagtatgcattattgcta
aatcccatagctaggtgtttggaggagctgcttccacaagaaactgctgataaactttgg
tgctcaatgatgttaagaacaacactcgttatatctacagtgtgtgtagcttttcttctg
ccattttttggtctagtgatggcattaataggttcacttctcagcatcttagtggccatc
ataatgccagccctgtgtttcttgaagatatctaggaacaaagcttcactcatacaggtt
gtattgagcttcgcaactgtggcaatgggcacagtgtgcgctatcatcgggacatactca
tccctgtcaaagttatcaagcaattactga
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integrated database retrieval system
