Zingiber officinale (ginger): 122036993
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Entry
122036993 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122036993
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122036993
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122036993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
Rcat_RNF216
IBR_1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122036993
NCBI-ProteinID:
XP_042452372
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADDEDYPSSSDVEDCYLTDQEDAIEEDVLQGLEDGHEEDCHWSLSSVITKESLLAAQKE
DLRKVMELLVLKEQHARTLLIHYRWDVERIFELLDQKGKDRLFSEAGVTVVENNGFSTSA
NPVTCNVCFETIPTAAITEMDCGHSFCNDCWTEHFIVKINDGQSRRIRCMAPKCSAVCDE
AVIRNLVSARCPDIADRFERFLLESYIEDNNKVKWCPSAPHCGNAIRVEGDIYCEVECTC
GIQFCFSCLSEAHSPCSCMMWELWIKKCQDESETVNWITINTKPCPKCHKPVEKNGGCNL
VACICGQAFCWLCGGATGRDHTWSNITGHSCGRFKEDQTKKTERARRDLYRYTHYHNRYK
AHTDSLKQESNLKETIQKKISISENKQSKIKDYSWVMNGLNRLFRSRRVLSYSYPFAFYM
FGDELFKDEMTAEERELKQNLFEDQQQQLESNVEKLSMFLEKDFPSSSDDEVMDIMRHVI
NLSSVVDNLCKQMYQCIENDLLYPLQRATHNIAPYKSKGLERASELCVPWDSDQSSSMKT
SHEAQTDSTPIGTAAVCKFRGSTSSDESRWASHKRPRKDAHGGAPLFDLNMPPEVIDKI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgaggattatccttcgtcgagcgatgtggaggattgctacctcactgac
caggaagatgccatcgaggaggacgtcctccagggccttgaagacgggcacgaggaggac
tgccactggtcgctgtcgtcggtcatcacaaaagagtccctcctggcagctcagaaagag
gatttgcggaaggtgatggagctgttagtgcttaaagaacagcatgcaaggacccttctt
attcattaccgttgggatgttgagaggatctttgaactgctcgatcaaaaggggaaggac
cgattgttttcagaagcgggagtcactgttgtggagaacaatggtttttctacttcagca
aatccagtcacctgtaatgtctgttttgagaccattcctacagctgcaatcactgagatg
gactgtgggcatagtttctgcaatgattgttggactgagcattttatagtgaagataaat
gatggtcaaagccggcgcattagatgcatggcccccaaatgcagtgctgtatgtgatgag
gcggtcataaggaatttagtcagtgcaaggtgtccagatattgctgatcgttttgagagg
tttctacttgaatcatatattgaagacaataataaggttaaatggtgccctagtgctcca
cattgtggaaatgctattcgcgttgaaggtgatatttattgtgaggttgaatgtacatgt
ggtatacagttctgtttcagttgtttgtcagaagcgcattcaccttgttcatgcatgatg
tgggagctgtggataaagaaatgccaggatgagtcagaaaccgttaattggataacaata
aacacaaagccttgtccaaagtgtcacaagcctgttgaaaagaatggtggttgcaatctt
gttgcctgtatctgtgggcaagcattttgttggttatgtggtggtgctactgggagagat
catacatggtctaatataactggccacagttgtggtcgcttcaaagaagaccaaacaaag
aagaccgagcgtgcaaggcgtgacttataccgctatacacattatcacaatagatacaag
gctcatacagattctctcaagcaggaaagcaatcttaaggaaaccatccagaagaaaatt
tccatttcagagaacaagcaatccaaaatcaaagactacagttgggtgatgaatggactg
aataggcttttcagatcaagacgagttctttcgtattcgtatccatttgccttctacatg
tttggggatgagctctttaaggatgaaatgacggcagaggagcgagagctgaagcagaat
ttgtttgaggatcagcaacaacagctggagtccaacgttgagaagttatctatgttcttg
gagaaggattttccaagctcttctgatgatgaggtcatggacataatgcgacacgtcata
aatctttctagtgtcgtcgacaatctttgcaaacagatgtatcaatgcattgagaatgac
ttgttgtatcctcttcaacgagcaactcacaacatagctccatataaatcaaaaggcctt
gagagggcgtcagaactatgtgtcccttgggattcagatcaaagttctagtatgaaaact
agtcatgaagcacagacagattcaactcccattggaactgctgctgtatgcaaattccgc
ggttccacaagttcggatgaaagcaggtgggcttctcataaacgacccagaaaagatgct
cacggtggagcgcctctttttgatctaaatatgcctcctgaggtgattgacaaaatctga
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integrated database retrieval system
