Zingiber officinale (ginger): 122037095
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Entry
122037095 CDS
T08725
Name
(RefSeq) transcription factor GAMYB-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122037095
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122037095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122037095
NCBI-ProteinID:
XP_042452510
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MNQMQNESRKTMILEKRMASLSIKEKGISVGSLSGENWVLKKGPWTSVEDAILADYVKRH
GEGNWNSVRKHTSLSRCGKSCRLRWTNHLRPNLKKGTFTPEEEQLIIELHAKIGNKWARM
AALMPGRTDNEIKNYWNTRIKRHQRAGLPLYPPNIRYQASEENQQYKNASEHMYSDKHPN
DGCRGSIFEMSDIHDIVADNFYAYHGAFDAPSSDVRVSSMLHQQFGSQNYILGNPALPNM
KRLRDSEKQCSGFTDSISDEHSKSKHIVLEPLWKKQKTFILDYPCDPDHQSKALQSSGGA
NHGGHVLNGTSSAPSPILGASELELPSFQCTEADTNCCFPCSSTLMSVDAYGESPSAAVS
SQSDCTSPRKSGLLEALVHEAQAISKPKFFGFPHPNASSISAGFKNKATELSCPNLGENG
SVWPDSSVLNDSLSTFLEHNGYKSVTAATPSVGLDSYPWTCMPHTCRMP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatgcaaaatgagagcaggaaaacaatgattctagaaaaaaggatggcttcc
ctatctattaaagaaaaaggcatcagtgtgggttctctaagtggagaaaattgggttctg
aaaaagggaccttggacttctgtagaggatgcaattttggctgattatgttaaaagacat
ggcgagggaaattggaattctgttcggaagcacacaagtctttctcgatgtggcaaaagc
tgtcgtttacggtggactaatcatctccgtccaaatttaaagaaaggcactttcacacca
gaggaagaacaattgattattgaactccatgctaagattggaaacaaatgggctcgtatg
gctgcacttatgcctggtcgaaccgataatgaaataaagaactactggaataccagaata
aaaagacaccaacgagccggtttgcctctatatcctcctaatatacgctatcaagcatct
gaggaaaatcagcaatacaagaatgccagtgagcatatgtacagcgacaagcatcccaat
gatggctgtcggggaagcatttttgaaatgtctgatattcatgatattgtagccgacaac
ttctatgcctatcacggggcttttgatgcaccatcctcagatgtacgagttagtagcatg
ctccatcagcagtttggatcgcaaaactatattttgggaaatccagcattgcctaacatg
aagcgacttagagactctgagaagcaatgcagtggtttcactgatagcatctctgacgaa
cattccaagtccaagcatattgtgctagaacctttgtggaaaaaacagaagactttcata
ttggattatccctgtgatcctgatcaccagagcaaggccctacaaagttccggaggtgca
aatcatggtggtcatgtcctaaatggcacatcgtccgctcctagtcctattctcggggct
tcggagttggagctcccttcattccaatgtacagaagctgatactaactgctgctttcca
tgttcatccactctcatgtcagtggatgcctacggtgaatctccctccgcagcagtctca
tcgcaatctgactgtacctcgccgagaaaaagtggcctactggaagcactggtacatgaa
gcacaggcaattagcaagccgaagttcttcggtttcccacatcctaatgcttcttcaatt
tctgcaggattcaaaaacaaggcgaccgaactttcttgtccaaatctcggagaaaatggc
tccgtttggccggacagctctgttctgaatgattccctatcgacattcttagagcacaac
ggctacaaatccgtaactgctgcaacaccatctgttggactcgactcgtatccatggacc
tgcatgcctcatacatgtcgaatgccttga
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