Zingiber officinale (ginger): 122037102
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Entry
122037102 CDS
T08725
Name
(RefSeq) serine/arginine-rich splicing factor SR34B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122037102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122037102
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
SR proteins
122037102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122037102
NCBI-ProteinID:
XP_042452518
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MGRTIGVLLGPNHQHVLVTLSPSLGRRLLQVTQTVSEFRLVLLDDYGGSDPGRSSSCSVP
AFLLGTIFTVATMSSRLSRTLYVGNLPIDIRESEVEDLFRKYGHIVEIQLKNPPRPPGYC
FVEFESSRDAEDAVRGRDGYEFDGQRLRVEVAHGGRGQSFPVGRGSRRGGGENKFGASHR
SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAQIYRDGDGVMGLVDYTNSEDMKYAIRKL
DDTEFKNPFSRSYIRVKSYERSMSRSRSPSRSRSRSRGPRRSRSKSYERAKSRSPSKPES
PRPRSQSPARASRSRSRSRSS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggactataggcgtgttgctaggccccaatcatcagcacgtgcttgtcacgctc
tctccatccctaggtcgacgcctgctacaagttacgcaaaccgtatcggaatttcgtttg
gttttgctcgacgattacggcgggagcgatccgggacggagctcgtcgtgtagtgtccct
gctttccttctcgggactatatttacagtggcaaccatgagttctcgactaagtcgtaca
ctttatgtgggcaacctccctatagatatacgggaatcagaagttgaagatttatttcgc
aagtatggccacatagtggaaattcaattgaagaatccaccaagaccccctggttattgt
tttgttgagtttgaaagttcgcgggatgcagaagatgcagtcaggggccgtgatggctat
gagtttgatggacaacgtcttagggttgaggtagcccatggtggtcgagggcaatcgttt
ccagttggacgaggtagtcggcgtggtgggggagaaaacaaatttggagcgtcacatcgt
tcagaatatcgagtgattgttcgggggcttccttcttcagcttcatggcaggatctaaag
gatcacatgaggaaggctggagatgtatgttttgcacagatttaccgtgatggtgatggt
gttatggggttggtggattatacaaattctgaagacatgaaatatgccattcgtaagctt
gatgacactgaatttaaaaatcccttttcgaggtcctacatccgggtgaaaagctatgag
agaagtatgtcaaggagccgaagtccaagcagaagccgtagtagaagcagaggccctaga
aggagtcggagcaaatcatatgaaagggctaaatcaagatcaccatccaaacctgaatct
ccacgacccagatctcagtctccagccagagcgtccagatcaagatctaggtcgagatcc
agttga
DBGET
integrated database retrieval system
