Zingiber officinale (ginger): 122037371
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Entry
122037371 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP107-like isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122037371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122037371
03036 Chromosome and associated proteins [BR:
zof03036
]
122037371
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122037371
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122037371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
122037371
NCBI-ProteinID:
XP_042452752
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MDMDTSPIYFDPQDLSSREQYRRYRKRQSTSNVSPISGQSVSKFSEARLLYEGNNIQRRP
NTALVLEDIKEEVTSIDSHLVSEFKFGSDSIRQGTHSLKLIKNEDDGLGESGDSTFRLFA
SLLDSALQGLMPFADLILQFEKACRSVSESIRYGSTGRHRVVEDRFMQQKARLLLDEAAS
WSLLWHLFGKGNEELPSKLLLSPPTSHQRACQFVMMDHTAQLCLRIILWLEGLASESLDL
AKRVRGSHVGSYFPNSGVWIHTQRFLKNKKDDPAIVHHVDFDAPTREVAQPILDDKKQDE
SLLEDIWTLLRAGRLEEACELCRSAGQPWRAASLCPFGGLEHFPSVEAMHKNGNMRQLQA
TELESGIGHQWRLWRWASYCASEKIAEQDGGRYEMAVYAAQSSNLRRLLPICTDWESACW
AMAKSWLHVQVDIELSQPQQGRVEGKPFGDDVNGSTVESWPYHVFDQQPRDLPALLQKLH
SSEVVNETVSRACKEQHRQIEINLMLGDIGHLLELLWAWISPAEDDQNILRPNGDPELIR
FGAHVVLVLRNLLDDDMKEAFKEKLMVVGDLILHMYSMFLFSKQHEELVGIYASQLARHL
CVDLFVQMMELRLNSSIHVKYKIFLLGMEYLPFSSEDGSKACFEEIIEKVLLRSRETKPN
KYDGKLSDVVEQLRLQSLQKATVIQWLCFSPPSTIRHFEIINAKLLTRALLHSNILFREF
SLISLSRVPKLPIGPHMLLSFLAEPLKQPEETLLSLEEDDVSENLEEFKDWREYYACDAT
YRNWLKFELENGAIPPSEISSEEKDRAIAAAVETLNTSLSLLLRGTPWLNAANSSIHDPT
GNVYIELHATAMLCLPSGECMIPDATSCTTLTSALYSSVSDDDVVNRELRVNVAISSSDN
YCVEIVLRCLAVDGDGLGLHEANDGGLLATIMAAGFKGELNRFQPGVRMEIFRLDAWYFK
EDLLINPANYIAKGLNRRCCLPEIILRCMQVSVSLAEMGNLKDHRDALVELVASSEYGIL
HLFSHHQLQEFLLIERECSLHAMEYEEELSVINSQQE
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatacttctccaatctatttcgacccccaagatctcagcagcagggagcag
tatcgtcgctacaggaaaagacaatccacctcaaatgtgtctcctatttcaggacagtca
gtatcaaagttttctgaggcaagattattatatgaaggaaacaatattcaaagacgccct
aatactgcacttgtactcgaggatatcaaagaagaagtaacatcaattgatagtcatcta
gtatctgagtttaaatttggctctgattcaatccgtcaaggaacccactcactgaaactt
ataaaaaatgaggatgatggtctgggtgaaagtggcgattcaacttttaggttgttcgcc
tcactacttgactctgcacttcaagggttgatgccctttgctgatctcattttgcaattt
gagaaggcatgtcggagcgtttctgaatcaatcaggtatggtagtactggcaggcataga
gtagtggaggacagatttatgcaacaaaaggctcggctattgcttgatgaggctgcatct
tggtcacttctgtggcatctatttgggaaaggaaatgaagagcttcctagtaaactacta
ttgtctccaccaacttcacatcagcgggcctgccagtttgttatgatggatcacacagca
cagttatgccttcgcatcattctttggcttgaaggactagcttcagaatctcttgatttg
gcaaaaagggtgagagggtcacacgtaggttcctattttccaaactctggtgtttggata
catacacaaaggtttttgaagaataagaaggatgatcctgctatagttcatcatgttgat
tttgatgccccaacacgtgaagtagctcaaccaattttggatgacaaaaagcaagatgaa
tctttgctagaggatatctggactttacttcgagctggaagactagaggaagcatgcgag
ttgtgtcgttcagctggacagccatggagggctgcaagtctttgtccttttggaggtctt
gaacattttccatccgttgaagccatgcacaaaaatggaaacatgaggcaattgcaagct
actgaattggaaagtggcattgggcaccaatggcgcctttggagatgggcatcatattgt
gcatcagagaagatcgctgagcaggatggtggaaggtacgagatggctgtctatgcagca
cagtctagtaacttgaggcgtttgctgccaatctgtactgactgggagtcagcttgttgg
gcaatggcaaagtcatggcttcatgtccaagtggacatagaattatctcaacctcaacaa
ggtagagtggaaggcaaaccgtttggagatgatgtaaatggatctacagtagaaagttgg
ccatatcatgtatttgatcagcaaccacgggatcttccagcactacttcaaaaacttcat
tcaagtgaggttgttaatgaaacagtttctagagcttgcaaagaacaacatcggcaaatt
gagataaatctcatgctaggagatataggacaccttctagagctactatgggcttggata
tcccctgcagaagatgatcaaaatattctgaggcctaatggagaccctgaactgattcgc
tttggagcacatgtagttctggttcttcgtaatctacttgatgatgacatgaaggaagcc
ttcaaggagaagctgatggttgttggtgatctcatacttcatatgtattctatgttttta
ttttctaaacaacacgaggaattggttggaatatatgcctctcagcttgcccgtcacctt
tgtgtggatctctttgtccaaatgatggagctcagattaaatagcagcattcatgtcaag
tataagatctttctattgggtatggaatatctgcctttctcatcggaagatggttcaaaa
gcttgttttgaggagattatagagaaggtacttttgagatcacgggaaacaaaacctaat
aaatatgatggcaaattgtctgatgttgtagaacagcttcgtctgcaatctcttcaaaaa
gctactgttattcagtggctctgtttctctccaccttctaccataagacattttgagatc
atcaatgcaaagcttcttacaagggctttattgcatagtaacatactgttcagggagttt
tcattaatatccttgtcaagagttcctaagttgcctataggaccacatatgttactcagt
ttcttggctgaaccactgaaacagcctgaagaaactctactttctcttgaagaagatgat
gtcagtgagaatcttgaagagtttaaagattggcgtgagtattatgcatgtgatgcaacc
tatcggaattggcttaaatttgaacttgagaatggagctattccaccttctgagatttct
tcagaagaaaaggatagagccatcgctgcagcagtagaaacactaaatacgtcattgtca
cttttactaagaggaaccccttggttgaatgcagctaatagtagtatccatgatcctact
gggaatgtttatattgaactgcatgctactgctatgctctgtctgccttccggtgaatgc
atgatccctgatgcaacctcttgtacaacattgactagtgcactctactcatcagtcagt
gatgacgatgtggtaaatcgtgaattacgggtcaatgttgcaatttcttcaagtgacaac
tattgtgtcgaaattgtacttcgctgcttggctgtggatggtgatgggcttggacttcat
gaagctaatgatggtggccttcttgccactattatggctgctggtttcaaaggtgagctt
aaccggtttcaacctggagtgagaatggagatatttcggcttgatgcttggtatttcaag
gaagatctattgataaaccctgctaattacatagcgaaagggcttaatcgtaggtgctgt
ctaccagaaattattcttcgttgtatgcaggtgtcagtttctcttgctgaaatgggcaat
ttgaaagatcatcgtgatgcacttgtagaattagttgcttcttcagaatatggaatcctt
catttgtttagtcatcaccagttacaggaatttttattgattgaaagggaatgctcatta
cacgcaatggagtacgaagaagagctgtctgtcattaattctcaacaagaatga
DBGET
integrated database retrieval system
