Zingiber officinale (ginger): 122037767
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Entry
122037767 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122037767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122037767
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122037767
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122037767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
122037767
NCBI-ProteinID:
XP_042453146
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Position
1A:146089374..146094064
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AA seq
314 aa
AA seq
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MESDSVECVSSIDGMDEDETSPPHPASSKIHAGAATPAGIPAATSVHELLECPVCTNSMY
PPIHQCQNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYNSLGCPEI
FPYYSKLKHEAQCSYRPYNCPYAGSECAVVGDIPFLVTHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFNCFGHYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSVEV
GANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
QNNDAGVCMPSVCS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatagcgtggaatgcgtctcgtcgatcgacggaatggacgaggatgagacc
tcccctccccaccccgcttcgtcaaagatccacgccggcgccgctacccccgctgggatt
cccgctgccaccagcgtccacgagctcctcgagtgccctgtctgtacaaactccatgtat
cccccaatccaccagtgtcaaaatgggcatacaatttgttccacatgcaaagcaagggtg
cacaaccgatgccctacttgtcgacaggagcttggagacattaggtgtttagcattggaa
aaagtagctgagtcacttgagcttccttgcaaatataattcacttggttgcccagagatc
tttccatactacagcaaactgaagcatgaagcccagtgcagctataggccttacaattgc
ccgtatgctggatctgaatgcgcagttgtgggggatatcccttttctagttacacattta
agagatgaccacaaggtagacatgcacagtggttgcacatttaatcatcgatatgtcaaa
tctaaccctagagaggttgaaaatgctacatggatgctgactgtatttaattgttttggt
cattacttctgcttgcactttgaagccttccagctgggaatggctcctgtgtatatggca
tttctgcgtttcatgggagatgagaatgaagcgcgaaatttcagctatagcgttgaggtt
ggggccaatggaaggaagctaatatgggaaggtacacctcgaagtattcgtgatagtcac
cgcaaagtccgggacagtcatgacggtcttatcattcagagaaacatggctctcttcttt
tctggtggtgataggaaagaactgaaactgagggtcactggtcggatatggaaggagcaa
cagaacaatgatgccggagtttgcatgccaagcgtctgcagctga
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