Zingiber officinale (ginger): 122037884
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Entry
122037884 CDS
T08725
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122037884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122037884
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122037884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122037884
NCBI-ProteinID:
XP_042453276
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All DBs
Position
1A:complement(147217274..147237572)
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AA seq
830 aa
AA seq
DB search
MKNRNLRRGSEGRKVENSAIVAVSRNRSGRRSSCAMMAPDAGAVAANEEKCLSDAIGRLQ
HNAFYMHRALDSKNLKDALKYAGEMLSELRTSSLSPHKYYDLYMRAFDELRKVEMFFTEE
TRRGSYVVTDLYELVQHASNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCHAIQHP
VRGLFLRSYLSQISKDKLPDISSEYEGGADTIDVAIEFVLQNFTEMNKLWVRMQYQGPIG
EKEKRAKGRSELRDLVGKNLHVLSQLEGVDLDMYKDSVLPRILEQVVNCKDELAQHYLMD
CIIQVFPDEYHLQTLETLLSAFPQLQPTVDIKTVLSPLMDRLSNYAASSTEVLPEFLKAE
AFSKLSNAVGKVIEAQVDMPIFGAVTLYVSLLTFTLRIHPDRLDYVDQILGACVLRLSGI
AKLEDSKATKQLVALLSAPLEKYKDISTALDLPNYLLVMDHLDTATKKVMAMIIIQNMKN
TACISAADKVESLFELIKGLVKDLDGSEDELDEDDFEEEQNSVARLIHYLYCNDAKEMFK
IILTVKKHVLLGGPKRFSFTVPPLVFSSLKLLRRLQCPDGDVNGDDISDTQKKIFQLLHQ
IIEALLSVPSPELALRLYLQCAEAASQCGFEPVSYEFLTQAFILYEEEVADSKAQVTAIH
LIIGTLQRMNVFGIENRDTLTHKATGYSAKLLKKPDQCRAVYACAHLFWATYQDGIQDGE
RVLLCLKRALRIANATQQMVHASRGNNEHVALFVEILNKYLYFFDKGIPQITNSIIQDLI
ELVRTELKNDNEKTDPSGSAEAFFSSTLRYIEFQKQKGGNISENFKQLEI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcgcaacctgcgaagaggaagcgaagggagaaaagtagaaaacagtgcgatc
gtcgcagtatctcggaatcgaagtgggcggagatccagctgcgcgatgatggcgccagac
gcgggagcggtggcggcgaacgaagagaaatgcctctccgatgctatcgggcgcctccag
cataacgccttctacatgcaccgcgctctggattcgaaaaatttgaaggatgcgctcaag
tatgctggggagatgctgtctgagttgcggacttctagtctgtcgccgcacaaatactat
gatctatatatgagggctttcgatgagttgagaaaggtggagatgttcttcacggaggag
actaggcgaggcagctacgtagtgactgatctgtacgagcttgtccaacatgcctcaaac
atcttgcctagactatatctactctgcacagtgggatctgtatatatcaaatcaaaggag
gctccggccaaggatgttcttaaagatctagtggaaatgtgtcatgctatacaacatcca
gttcgtgggctgttcttaaggagctatctgtctcaaataagcaaagataagttacctgat
atcagttcagaatatgaagggggtgctgacactattgatgttgctattgaatttgtactt
cagaacttcactgagatgaataaactctgggtcagaatgcaatatcaggggcccatagga
gaaaaggagaagagagctaaaggaaggagtgaacttcgtgatcttgttggaaaaaatctt
catgttcttagtcagcttgagggtgttgaccttgatatgtacaaggattctgttcttcct
aggatattggaacaggttgtgaactgtaaagatgagctagcccagcattacttaatggat
tgtataattcaagtttttcctgatgaatatcatttgcagactcttgaaacattattaagt
gcatttcctcagcttcagccaactgttgacatcaaaacagtgctgtctccacttatggat
aggctatcaaattatgctgcatcgagtacagaagtactaccagaattcttgaaagctgaa
gctttttctaaattgagcaatgctgttgggaaggtgatagaagcacaggttgacatgccc
atctttggagcagtaacactatacgtgtcccttcttacatttactcttcgcatacatcct
gatcgacttgattatgtagatcaaatcctgggagcatgtgtactgcgactctcagggatt
gcgaaacttgaggatagcaaagcaactaagcagcttgttgcacttttgagtgctccatta
gaaaagtataaagatatttctactgcattagatctacctaactatttgctagtcatggat
catttggatactgcaacaaaaaaggtcatggctatgataatcatccaaaacatgaagaac
acagcctgcatctcagcagctgataaagttgagtctctgtttgaattaataaaaggactt
gtaaaggatcttgatggcagtgaagatgagcttgatgaagatgactttgaagaggaacag
aattctgttgctcgtctcattcattacttgtactgcaatgatgccaaggaaatgttcaag
attatattgactgtgaagaagcatgttctccttggaggtcctaaacgcttttctttcact
gtacctcccctagttttttcttccctcaagttgcttagacgcttgcaatgtcctgatgga
gatgtaaatggagatgacatctctgatacacaaaagaaaatattccagctcttgcatcag
attattgaggccttgttgtctgttccttcaccagaactcgctttaagattatacttgcaa
tgcgctgaggctgctagccagtgtggttttgaaccagtttcttatgaattccttacacaa
gcatttatattatatgaagaagaggttgcagactcaaaagcacaggtgaccgcgatacac
ttgattattggaacactgcagcgcatgaatgtatttggaatagagaacagagatactctt
acacataaagccactgggtattctgcaaaacttttgaaaaagcctgatcagtgcagagca
gtttatgcttgtgcacatctgttttgggctacctaccaagacggcattcaagatggagaa
agggtcctcctctgtttgaagcgcgctttgcggattgccaacgctacccagcagatggtg
catgcttccaggggtaacaatgaacacgtggcactattcgttgaaatattgaacaagtac
ctatacttcttcgataaaggaattcctcaaataacaaactcgataattcaggatctaatt
gaacttgtcaggactgaactgaaaaatgacaacgaaaaaacagacccatctggatctgct
gaagccttcttctccagcacacttcgatacattgaattccagaagcagaaaggtggaaac
atcagcgaaaattttaaacaactcgaaatttaa
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