Zingiber officinale (ginger): 122037948
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Entry
122037948 CDS
T08725
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122037948
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122037948
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
Motif
Other DBs
NCBI-GeneID:
122037948
NCBI-ProteinID:
XP_042453380
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Position
1A:150232595..150244162
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AA seq
425 aa
AA seq
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MTDTNGGADLESAQVAKAEMEVIPHTEVEPLSAAHVEQQKWPGWPGDNVFRLIVPVTKVG
SIIGRKGEFIKKICEETRAKVRILEGAIGTPERIVLISAREELETALSPAMDAALRVFKR
VNDISEDDGPSTLCSVKLLIASSQAISLIGKQGASVKAIQDNSGAGVRILAKEELPYYAT
AEERIVDIQGETSKALKALEAVLAHLRKFLVDHSILPLFEKSLVPAAAQDQAKDPRGDKT
QSLIHSAQQTGSGKDFSVSSNLLHMENRIPIDLPYQRARLSIYGQDPSSAIRTPALGRTA
SSLISQITQTMQVPLSYAEEIIGIGGGNISFIRRTSGAVIALEESRTVPDEIVIEIKGNS
TQVQTAQQLIEDVVTGHKEPAPRSYSSYDTDYRSSYANLSGSGYLSSPFRGYGSSSLGGY
GAYRH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaccaacggcggcgccgacctagaatcggctcaggtggccaaggccgagatg
gaggtcatcccccacacggaggtggagccgctttcagccgctcatgtagagcagcagaag
tggcctggctggcctggggacaacgtctttcggctgatcgtgcccgtgaccaaggtgggg
agcatcatcggacgcaagggtgagttcatcaagaaaatatgcgaagagacccgcgctaag
gtccgtatccttgaaggagccatcggcactcccgaacgcattgttttgatttcagcaaga
gaagaactagagacagcattatcaccagcaatggatgccgccttaagggtatttaagcgt
gtcaatgacatctcagaggatgatggtccatctacactatgttcagttaaattactgatc
gcatcatcacaagcaatttctttaataggaaagcaaggtgcttcagttaaagctatacaa
gacaattctggtgctggtgtgcgcattctggctaaagaggagcttccatactatgcaact
gcagaagaacgaattgtggatatacagggtgaaacttcgaaagctctgaaagcactagag
gcagtacttgctcatctcagaaagtttcttgttgatcacagcatactccctttgtttgag
aagagtcttgtgccagcagcagctcaagatcaggcaaaagatcctcggggtgataagaca
caatccttgattcattctgctcaacaaactggatctggaaaggatttctctgtttcatcg
aacttgctgcacatggaaaatagaattccaattgatttgccatatcaacgtgctagactg
tcaatatatggtcaagatccttcttctgccatacgtactccagcactagggcgtacggct
agttctttgatttctcagatcacccaaacgatgcaggttccgctgtcatatgcagaggaa
atcattggtattggaggaggaaatatatcattcattcgccgtactagtggtgcagttatt
gcactcgaggagagtagaactgtacctgatgaaatagtaatcgagataaaaggcaattcg
actcaggttcaaactgcacagcagctcattgaggatgttgtaactgggcataaagaacca
gcacctaggagctatagcagctacgacactgattaccggtcatcttacgccaacttatca
ggttcagggtacttatcttcgccttttagaggctatggatcttccagtttaggagggtat
ggagcctaccgacactga
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