Zingiber officinale (ginger): 122038010
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Entry
122038010 CDS
T08725
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3 isoform X1
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122038010
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122038010
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122038010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
ADIP
Stn1
DUF1351
Motif
Other DBs
NCBI-GeneID:
122038010
NCBI-ProteinID:
XP_042453476
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Position
1A:152554838..152557334
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AA seq
332 aa
AA seq
DB search
MSLFPQQHDLHLQQQQQQQSIPFSRNFVPISGQISDPISFFNTGSFPDPPHPSVVNALGL
APGAAVAADGWEPRAKRLKEYDLLENSHITSIDFLQMGSVSTGLGLSLDDRRAAVSSGEP
PLLLLPMVDEGILRDAQSMEADMDRFIKIEGERLRQSILEKIQAKQFQTLALVEDMIHRK
IREKDSEVENLNKRNMELEEQMKQLATEVDAWQQRAKYNENLVNLLKYNLEQLHAQNRNN
KEGCGDSEVDDTTSCCNGGIGLQLMLKENIDSKEIACKVCRGNEACMLLLPCQHLCLCKE
CESKLSFCPLCQSSKLIGMEILSLVNLCCLIW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttcccgcagcagcacgacctccatctccagcagcaacagcagcagcaatcc
attcccttcagcagaaattttgtgccgatttctggacaaatctccgatccaatctccttt
ttcaacaccggaagcttccccgaccctcctcatccgtccgttgtaaatgccctgggactt
gctcctggcgcggctgtagcggcggacggatgggagccaagagcgaagcgtcttaaggag
tatgatttgctagagaactcgcacataacgtccatcgattttttgcagatgggttcggtt
tccacagggctaggattgtctttggacgaccggagggcggcggtttcttctggggagcct
ccgctattgttgctacctatggttgatgagggtatccttcgcgacgcgcagagtatggaa
gctgatatggaccgctttatcaagattgagggtgaacgtttaaggcaatcaattttggag
aagattcaagcaaaacaatttcaaacacttgcactggttgaggatatgatccacagaaaa
ataagagagaaagattcagaagtggagaatttgaacaagaggaacatggaactcgaggaa
cagatgaagcagttggcaaccgaagtagacgcctggcagcaacgggcgaagtacaacgag
aacttggttaacttgctcaagtataatctggagcaacttcatgctcagaacaggaacaac
aaagaaggttgtggtgatagtgaggttgacgacacgacctcttgctgcaatggcggcatt
ggtttgcaactcatgttaaaggaaaacatcgactcaaaggagattgcttgtaaggtttgt
agaggtaacgaagcgtgcatgctcttattgccatgtcaacatctttgcctgtgcaaagag
tgcgagagcaaactcagtttctgtccactgtgtcagtcttcaaagctgatcggcatggag
attttatctctagtgaatctttgctgccttatttggtga
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