Zingiber officinale (ginger): 122038085
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Entry
122038085 CDS
T08725
Name
(RefSeq) KH domain-containing protein SPIN1-like isoform X1
KO
K14945
protein quaking
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122038085
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122038085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
122038085
NCBI-ProteinID:
XP_042453595
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All DBs
Position
1A:complement(154730481..154734983)
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AA seq
287 aa
AA seq
DB search
MSSLYAQRSSSPAAPVSSQTSSKEDIDRIGVANNSQYLAKLLSEHQKLGPFMQVLPICSH
LLNKEILRVSGMVSSQGFGDCNWRQQRSPSPMANSESICNSGTCISILNAHQQEMLGFSQ
GVAIDWQGALTSPKSCIIKKVLRLEIPVDTYPNFNFVGRLLGPRGNSLKRIEASTGCRVY
IRGKGSIKDSDKEEKMRGRPGYEHLNDPLHILIEVESPANTIDARLRHAHEVIEELLKPV
DELQDHYKKQQLQELAMLNSGSRDGSPHPSGSVSPFYNAMKSAQAGW
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcttatatgctcagaggtcctcctcccctgctgcaccagtatcctcacagaca
agtagcaaagaagacatagacagaatcggtgttgcaaataacagtcagtatctggcaaag
ctgctatcggagcatcaaaaactcgggcctttcatgcaggttcttcctatatgtagccac
ttgttgaacaaagagatattaagagtctcaggcatggtttctagccaaggatttggtgac
tgtaactggaggcagcaaagaagtcccagtcccatggctaattccgaatcgatttgtaat
tctgggacttgtatcagtattctgaatgcacaccaacaagagatgctaggcttttcacaa
ggagttgcgatcgattggcaaggagcacttacaagtccaaagtcatgcataataaagaaa
gtattgcgtttagagattccagtggatacctaccctaatttcaattttgttggacgcctt
cttggacccaggggtaattcgctgaaaagaattgaagcatcaaccggatgtcgtgtttac
attcgaggaaagggttcaataaaagattctgacaaggaggagaaaatgaggggaagacca
ggttatgaacacttgaatgatccgttgcatatcttgattgaggtagagtcgccggcaaat
acgatcgatgctagattgagacatgcacacgaagttatagaagagttgctgaaaccagtg
gatgaattgcaggatcactataagaagcaacaacttcaagaattagccatgttgaattca
ggttcaagggatggcagccctcatccaagcggcagtgtgtctccattttacaatgctatg
aagagtgcacaggcaggatggtag
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