Zingiber officinale (ginger): 122038086
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Entry
122038086 CDS
T08725
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00520
Amino sugar and nucleotide sugar metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
122038086
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
122038086
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
122038086
NCBI-ProteinID:
XP_042453599
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Position
1A:154828346..154843132
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AA seq
685 aa
AA seq
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MLLFCNNKKKRRLAWSPGCYCESMMCVEGASSGALCLVFMLFFVPHCLSQKLEANLSALL
TIDASPQSNHMIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPSTPSNIDPWAIIG
NESSIYVSTERTSCFTRNEVALKMEVLCGEGESVACPDGVGIYNPGFWGMNIEEKKVYNL
ILYLRSPDSIDISVSLTSSDGLLKLASTNIVADASDVSNWTRVELQLEAIATDRTARLQL
TTTKKGIIWFDQVSLIPLDTYKGHGFRKELISMVENLKPRFIRFPGGCFVEGEWLRNAFR
WRETIGPWEERPGHFGDVWMYWTDDGLGYLEFLQLSEDIGAAPIWVFNNGISHQDQVDTT
SISPFVQDVLDSIEFARGSPDSKWGSVRAEMGHPEPFQLEYVAVGNEDCWKKNYRGNYLK
FYYAIKAVYPDIKIISNCDGSSSPLDHPADFYDYHVYTSAGNLFKRNNQFDRTSRTGPKA
FVSEYAVTGSDAGKGSLLASLGEAAFLIGVERNSDVVSMASYAPLFVNTNDRRWNPDAIV
FDSWQQYGTPSYWMQYFFRESSGATFHPSKVQTNSSSLVASAITWQDPADNQNYLRIKVV
NFGKDSVSLKISINGLESAINSFGSTTILTSDNLMDENSFALPNKVVPVSSVLPNAGTAM
DVVIAPQSLTSFDLPLAAAEFRSAI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttattattttgcaacaacaaaaaaaaaagaaggctagcttggtcaccgggttgttac
tgtgaaagcatgatgtgtgtggaaggggcatcttcgggtgctttatgtcttgtttttatg
ttattttttgttcctcattgcctttctcaaaagctggaggccaacctgtctgcgctgctt
actattgatgcttcacctcaatctaatcatatgattcctgagactctatttggtattttt
tttgaggaaattaatcatgctggagctggtgggatatgggctgagcttgtgagtaacaga
ggttttgaagctggtggtcctagcacaccttcaaacattgatccgtgggccatcattgga
aatgaatcttccatttatgtgtcaactgagcgaacatcttgtttcacccgtaatgaggtt
gcactgaagatggaggtactctgtggcgaaggggaatctgttgcctgtcctgatggtgtg
ggcatatataaccctggattttggggcatgaatatagaagaaaagaaggtatataatctt
atactgtatttaagatcacctgactctatagatatatccgtttcacttacaagctcagat
ggactactcaaactggcttctacaaatattgtagctgatgcttcagatgtgtcaaactgg
acaagggtggagctacagttggaagctatagcaacagacagaactgcgaggcttcaattg
actactacgaaaaaaggaattatttggtttgatcaagtttcgctcattccattagacact
tataagggacatggcttccgtaaggaattgatatcaatggtcgaaaatttgaaaccacga
ttcattaggtttccaggaggttgcttcgtcgaaggtgagtggctacgtaatgcatttcgg
tggagagaaaccattggtccatgggaagagagacctgggcacttcggtgatgtgtggatg
tactggaccgatgatgggctgggataccttgagtttcttcagctttctgaggacattggt
gcagcccccatatgggtattcaacaatggaattagccatcaggatcaagtggatactacc
agcatttctccttttgtgcaggatgttttagatagtattgagtttgctaggggaagccct
gattcaaagtggggctctgttcgtgctgagatgggacatccagaaccttttcagttagag
tatgttgcagttggaaatgaggactgctggaagaaaaattatcgagggaattacttgaag
ttctactatgccataaaagcggtttacccagatattaagattatttcaaattgtgatggt
tcatctagtccactggatcatcctgctgatttttatgattaccatgtttatacctcagct
ggcaatttgtttaagagaaataatcaatttgatcgcacatcacgtactgggcctaaggct
tttgttagcgaatatgctgtgactggatcagatgccgggaagggtagccttttagcatca
ctaggagaggctgcattcctcattggagtagaaagaaatagtgatgttgtatctatggca
agttatgctcctctttttgtcaataccaatgatcgcagatggaacccagatgctattgtc
ttcgattcctggcagcaatatggaactccgagctactggatgcaatactttttcagggaa
tcaagcggtgcgacttttcacccttcaaaagttcaaaccaactctagttcgttggttgca
tctgctattacttggcaggacccagcagacaatcagaattacttgagaataaaggtcgtc
aactttgggaaggatagtgtgagcttgaagatctccattaatggactagaatctgccatt
aactcatttggatcgacaaccatactcacatccgataatttgatggatgaaaattccttc
gcattaccaaacaaggtggtgccggtttcaagcgtattgccaaatgcagggaccgcgatg
gatgtcgtaattgctccacagtcccttacttcgttcgacctgccactagctgccgctgaa
ttcagatctgcaatttga
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