Zingiber officinale (ginger): 122038089
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Entry
122038089 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122038089
00071 Fatty acid degradation
122038089
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122038089
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122038089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122038089
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122038089
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122038089
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122038089
Exosomal proteins of breast cancer cells
122038089
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Fusion_F0
Motif
Other DBs
NCBI-GeneID:
122038089
NCBI-ProteinID:
XP_042453603
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All DBs
Position
1A:complement(154866961..154879676)
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AA seq
692 aa
AA seq
DB search
MESAARRRLRAISGHLLASGDRDRSSNLSTNATVGEFALAQGYSVVLPEKLQTGKWNVYR
SARSPLKLVSSFPEHPDIATLHDNFEHAVETFRNYKYLGTRIHMDGTVGEYKWMTYGEIG
SSRTAVGSGLIYHGIPKGACVGLYFINRPEWIIFDHACSAYSYISVPLYDTLGPDAVQYI
VNHASVEAIICVPQTLSNLLSFLSQMPSLRLIVVVGGIDEKMPLISSAISVKIITYSKLL
SEGQSNIQRHCPPKPEDVATICYTSGTTGTPKGVVLTHGNLISNVAGSSLTTKFYPSDVY
ISYLPLAHIYERVNQILLAYYGVAIGFYQGDNLKLMEDMTALRPTIFASVPRLYNRIYDS
VMNLVKTSGGLRERLFNAAYNAKMQAITNGKNPSPIWDRLVFNKIREKLGGRVRFMSSGA
SPLSADVMDFLRVCFGGLVVEGYGMTESSCIISVMDAGDNLTGHVGSPHPACEIKLEDVP
EMNYTSDDRPYPRGEICVRGPLVFQGYYKDEVQTKEVMDEDGWLHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVSQSFVYGDSFNSHLVAIVSVDQDVLIAWA
ASEGIKYEDLAQLCSDPRTRAAVLADMDDVGKQAQLRGFEFVKAVTLVVEPFSLENDLLT
PTFKIKRPQAKAYFAKAIADMYAELVSHQKPI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgctgcccgacgccggctgcgggccatctccggccatcttctcgcctctggc
gatcgggataggagttctaaccttagcaccaacgcaaccgtcggcgagtttgcgcttgca
cagggttacagtgttgttcttcctgagaaattgcaaactgggaaatggaatgtttacaga
tctgcaagatcaccactgaagctagtctctagttttccagagcatccggatattgcaaca
ctgcatgataattttgaacatgctgtagagaccttccgaaattacaagtatttggggaca
aggattcatatggatggaacagttggggaatacaagtggatgacctatggagaaattggt
tcatctcggacagcagtaggatctggcctcatttatcatggaatacctaagggtgcatgc
gtaggactctattttataaacagaccagagtggatcatttttgaccatgcctgctcagca
tactcttatatatctgtgcctctttatgatacactgggacctgatgctgtgcagtatata
gttaatcatgcatcagtcgaggccattatttgtgtaccccaaacactgagcaatctactt
agcttcttatctcagatgccatctcttcgtttgatagtggttgttggtggaatagatgag
aagatgcccttgatttcttcagcgatttcagtgaagattattacttactcaaaattgctt
agtgaagggcaaagtaatattcagagacattgcccaccaaagcctgaagatgttgcaact
atctgctataccagtggtacaactgggacacctaagggagttgtacttactcatggaaac
ttgatttcaaatgttgctggatctagcttgactactaagttctatccttcagatgtgtac
atatcatatctgcctttggctcatatctatgagcgtgttaaccagattttgttggcatat
tatggagttgcaattggtttctatcagggggataatttgaagctaatggaggatatgaca
gctcttaggcctaccatatttgctagtgtccctcgattatacaacagaatctatgatagt
gtgatgaatctggtgaagacatctggtggcctgcgagagaggttatttaatgctgcctac
aatgccaagatgcaagcaataacaaatggaaagaacccatcaccaatttgggatcgatta
gtatttaacaaaatcagagaaaagcttggaggccgtgtccgattcatgtcttcaggtgcc
tctccattgtcagcagatgttatggattttctacgagtgtgctttggtggtctggttgtt
gaaggctatgggatgacagagtcatcttgtatcattagtgtaatggatgcgggtgacaat
ttaactggtcatgttggttctccacaccctgcttgtgagatcaagcttgaagatgttcct
gaaatgaattacacatctgacgaccgaccatatccccgtggagaaatttgtgtgagaggt
ccactcgtgtttcaaggttattacaaggatgaagtgcagaccaaggaggtaatggatgag
gatggctggctccacacaggagacataggattgtggttacccggaggacgtttaaagatc
attgacaggaaaaagaacatttttaagttggcgcaaggtgagtacattgccccagaaaag
atagagaatgtatatgccaaatgcaagtttgtttctcaaagctttgtctatggtgatagc
ttcaactcccatctagttgcgattgtttcagttgatcaagatgtattaatagcttgggct
gcatctgaaggaataaagtatgaagatttagcccagctttgcagcgacccacggacaagg
gccgcagtccttgctgatatggatgatgttggaaagcaggctcagctgaggggttttgaa
tttgtcaaagctgtcactttagtcgtggagcctttttctttagaaaatgatctacttacc
ccaacattcaagataaagagacctcaagcgaaggcttattttgccaaggcgatagcagat
atgtatgctgagttagtgtcacatcagaaaccaatataa
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