Zingiber officinale (ginger): 122038108
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Entry
122038108 CDS
T08725
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00260
Glycine, serine and threonine metabolism
zof00310
Lysine degradation
zof01100
Metabolic pathways
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122038108
00310 Lysine degradation
122038108
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122038108
Enzymes [BR:
zof01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
122038108
1.5.3.7 L-pipecolate oxidase
122038108
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Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_oxidored
NAD_binding_8
GIDA
FAD_binding_2
Thi4
3HCDH_N
HI0933_like
Pyr_redox_2
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
122038108
NCBI-ProteinID:
XP_042453634
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Position
1A:complement(155309143..155310695)
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AA seq
413 aa
AA seq
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MAAACGDRFDLVVVGAGIMGSCAAYYAAKRGLRVLLLEQFDFLHGLGSSHGESRTIRATY
PENYYPSMVLEARCLWEEAQAEAGYRVVTSTAHFDFGPEDNKSLQSVIDSGGHHREVNIR
LIDRGSSSSVFSGVFALPDGWIGVVSDIGGVIRPTKAVAMFQALALKKGAILKDRTRIIA
IEKDGENREGVRVRAAGGEIFLGSKCVITAGAWMKKLVKSVTEIDLPIQPLHTTICYWKI
KAGHEAEFTAEGGFPTFASYGDSYIYGTPSLEFPGLIKIALHGGRPCDPDRRDWTASSSG
VMVDSVGEWIRKILPGKVESGNPVITQACLYSMTPDGDFVIDFLGGEFGKDVVVAGGFSG
HGFKMGPVVGRIVAEMAIDGAVEGLEIRHFGIRRFAECSSGNAKEFEEQVSSH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatgcggcgaccggtttgacctcgtcgtcgtcggcgctggtatcatgggg
agctgcgccgcttactacgcggccaagcgcggcctccgcgtgctgcttctggagcagttc
gacttcctccacggcctaggctcctcccacggagagtcgcgcaccatccgcgccacatac
ccggagaactactacccctctatggtcctcgaggctcgctgtttgtgggaggaggcccag
gccgaggccggctaccgcgttgttacctccaccgcccacttcgacttcggccccgaggac
aacaagagtctccagtctgtgattgactccggtggccatcatcgagaggttaacatccgc
cttatcgaccgaggatcttcgtcctctgtcttctccggagtgttcgctctcccggatgga
tggatcggcgtcgtctccgacatcggcggcgtcatcaggccgaccaaggctgtggcgatg
ttccaagctcttgccctaaaaaaaggggcgattctgaaggaccgcacccgaataatcgcg
atcgagaaggacggcgagaacagagaaggtgtccgcgtccgcgccgccggtggcgaaatc
tttttagggagcaaatgcgtgataacagcaggcgcgtggatgaagaaactcgtcaaatca
gttaccgaaatcgatcttcccatccagcccctgcacaccaccatctgctactggaagata
aaagcagggcacgaggcggagttcacggcggagggaggattcccaacctttgccagctac
ggcgacagctacatatacggaacgccgtcgctggagttcccagggcttatcaagatcgct
ctgcacggcggccggccgtgcgaccccgaccggcgagactggacggcgagcagctccggg
gtgatggtggactccgtgggggagtggatccggaagatcctgccggggaaggtcgagtca
gggaatccagtgataacgcaggcatgcttgtactcgatgacgcccgacggcgacttcgtg
atcgacttcctcgggggcgagttcgggaaggacgtggtggtcgccggcgggttctccggg
cacgggttcaagatgggtccggtggtggggaggatcgtggcggagatggcgatcgatggg
gcggtggaggggttggagattaggcacttcgggatccggcggttcgcggagtgctcgagt
gggaacgccaaggagttcgaggagcaagtgtcttctcattga
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