KEGG   Zingiber officinale (ginger): 122038162
Entry
122038162         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122038162
   04120 Ubiquitin mediated proteolysis
    122038162
  09126 Chromosome
   03083 Polycomb repressive complex
    122038162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122038162
   04121 Ubiquitin system [BR:zof04121]
    122038162
   03036 Chromosome and associated proteins [BR:zof03036]
    122038162
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122038162
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122038162
   Cul7 complex
     122038162
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122038162
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122038162
SSDB
Motif
Pfam: Skp1 Skp1_POZ RACo_linker
Other DBs
NCBI-GeneID: 122038162
NCBI-ProteinID: XP_042453726
LinkDB
Position
1A:158345210..158349755
AA seq 160 aa
MAKAITLRSSDGEVFEVDEAVAMESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK
HVEVSVATASKTTDDASRLDEDLKSWDSEFVKVDQATLFDLILAANYLNIKGLLDLTCQT
VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcgaaggcgatcacgctgaggagctccgacggtgaggtattcgaagtcgacgaggcg
gtagccatggaatcgcagaccatcaagcacatgatcgaggacgattgcgccgacaacggc
attcctctgccaaacgtcacctcgaaaatcctatcgaaagttatcgagtattgcaagaag
cacgtcgaagtctccgtcgctactgcctcgaagacaaccgatgacgcctcccggcttgac
gaagatctcaagtcttgggattcagagtttgttaaggtcgatcaggccaccctatttgat
cttatactggctgcaaactacctgaatataaaagggcttctcgatttgacttgccaaact
gtggctgatatgatcaagggaaagactcctgaagaaatccgcaaaacatttaacataaaa
aatgactttactccagaggaagaggaagaagttcgaagggagaatcagtgggcctttgaa
tga

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