Zingiber officinale (ginger): 122038162
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Entry
122038162 CDS
T08725
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122038162
04120 Ubiquitin mediated proteolysis
122038162
09126 Chromosome
03083 Polycomb repressive complex
122038162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122038162
04121 Ubiquitin system [BR:
zof04121
]
122038162
03036 Chromosome and associated proteins [BR:
zof03036
]
122038162
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122038162
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122038162
Cul7 complex
122038162
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122038162
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122038162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
RACo_linker
Motif
Other DBs
NCBI-GeneID:
122038162
NCBI-ProteinID:
XP_042453726
LinkDB
All DBs
Position
1A:158345210..158349755
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AA seq
160 aa
AA seq
DB search
MAKAITLRSSDGEVFEVDEAVAMESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK
HVEVSVATASKTTDDASRLDEDLKSWDSEFVKVDQATLFDLILAANYLNIKGLLDLTCQT
VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgatcacgctgaggagctccgacggtgaggtattcgaagtcgacgaggcg
gtagccatggaatcgcagaccatcaagcacatgatcgaggacgattgcgccgacaacggc
attcctctgccaaacgtcacctcgaaaatcctatcgaaagttatcgagtattgcaagaag
cacgtcgaagtctccgtcgctactgcctcgaagacaaccgatgacgcctcccggcttgac
gaagatctcaagtcttgggattcagagtttgttaaggtcgatcaggccaccctatttgat
cttatactggctgcaaactacctgaatataaaagggcttctcgatttgacttgccaaact
gtggctgatatgatcaagggaaagactcctgaagaaatccgcaaaacatttaacataaaa
aatgactttactccagaggaagaggaagaagttcgaagggagaatcagtgggcctttgaa
tga
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integrated database retrieval system