Zingiber officinale (ginger): 122038193
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Entry
122038193 CDS
T08725
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122038193
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
122038193
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
122038193
NCBI-ProteinID:
XP_042453762
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All DBs
Position
1A:complement(160652145..160673949)
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AA seq
290 aa
AA seq
DB search
MMHGGPSGFHNAPVTRTLVISSAIITVTSALRGRSRSIGLSYQDIIQNYSLWKIVPSIFA
FSSSPESIIGLYLIYYFRVFERQIGSNKYSVFVLFNLVASTFFQIVALGLIKDSQVLASG
PYGFIFASFVSFYFDIPVTSRFRMFGLNLSNKSAVYFAAFQLVLSAWRRSFIPVISGLLA
GFVFRANLFGICKLKFPKKLTSVFSWLFLLYPSSFPSSANIRRNAHISNIDHQVQRNNRS
VGNFMPEPSESSIATLVSMGFESNAARQALLQARNDLNVATNILLEAQSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacggaggaccatcaggatttcacaacgcgccggtcacgcgaaccctagtgatc
tctagcgccatcatcacagtcacctctgcccttcgtggccgttcccgcagcatagggttg
tcgtatcaggatattattcagaactatagtctttggaagattgttccatcaatatttgca
ttttcatcctctccagaatcgataattggcttgtatctgatatattatttcagagtattt
gagagacagataggctctaacaagtactcagtttttgttttgttcaatttagtggcatcc
acatttttccaaattgtggctttaggacttataaaagattctcaagtacttgcatctggg
ccttatggtttcatatttgcttcctttgtatctttttattttgacatccctgttacttca
cgattccgtatgtttggactgaacttgagtaacaagtcagctgtatactttgccgctttt
cagcttgttttatctgcctggagaaggtcatttataccagtcataagtggtcttcttgct
ggttttgttttccgagccaatctatttggcatctgcaagcttaagttccccaaaaagtta
acatcagtattttcatggttatttttgttgtatccaagttcattcccttcaagtgccaat
atcagaagaaatgcacatatatctaatatcgaccatcaggttcagcggaacaatcgttca
gtgggaaattttatgccagaaccatcagagtcttcgattgcgacattggtgtccatgggc
tttgagagcaatgctgctaggcaggcactccttcaggctagaaatgacttaaatgtagca
acaaacattctcctcgaagcacagtctcggtaa
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