Zingiber officinale (ginger): 122038378
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Entry
122038378 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122038378
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122038378
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122038378
NCBI-ProteinID:
XP_042454036
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Position
1A:169301130..169304891
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AA seq
529 aa
AA seq
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MMTSSSAPFFRVGEEDEYGQHPSVLQQPSSAAPASSSATVAPQKKKRNLPGKPSKYPDAE
VIALSPKSLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPNEVRRRVYLCPE
PTCVHHDPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKRYAVHSDWKAHSKICGTREYRC
DCGTLFSRRDSFITHRAFCDALAQENARLPAHGLNTSFGGQLYANRTLNLGLPQLNPTQL
SSLLRTTGTGAAGASQFDHVNMATASSSSSFRQPPPPQQQQQQTHPNSAFFLGGSSYSQQ
GFNTEELLQSKPFHGMMQLQDLQTVSANNAATSSSAANLFDLGFFSGSAGNIDNVNHMMN
NHIDTNMPSPFYNPSLQGEHEQQQQQMPATALLHKAAQMELAAPTSNFRPSFYMGGRESG
SSRSQLEQENHFQDLINSITNGNGSGTLVFGNEQMAAFGGFNPAGLDQESKLHHNLTAGG
RGGITRDFLGVGGMVRSMTTAGGVHLGVENINSMDSEMKARSFGAGRIQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatcttcatccgctcctttcttcagagtaggggaggaagatgaatacggccag
cacccttcggtgctgcagcaaccgtcatcggctgcgccagctagctcgtcggcgaccgta
gctcctcagaagaagaagagaaacctccctggaaaaccaagcaagtatccggacgcggag
gtgatcgccttgtcgccgaaatcgctgctggcgacgaatcgcttcgtgtgcgaagtgtgc
aacaaggggttccaacgggagcagaacctgcagctccaccggcgcggccacaacctgccg
tggaagctgaagcagaagaacccgaacgaggtgcggcggcgggtgtacctctgcccggag
cccacctgcgtccaccacgacccctcgcgcgccctcggcgacctcaccggcatcaagaag
cactactgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagcgctac
gccgtgcactccgactggaaggcccattccaagatctgcggcactcgcgagtaccgctgc
gactgcggtactctcttctccaggcgagacagtttcatcacccacagagctttctgcgat
gcattggcacaggagaacgcgaggcttccggctcatggcttgaacaccagctttggcggc
cagctatatgcaaatagaaccttaaacttggggcttcctcaactcaaccctacgcagctc
tcctccttactcaggaccactggcaccggtgccgctggagcttcacagtttgatcacgtc
aacatggccacggcctcttcctcctcctccttccggcagccgccgccgccgcagcagcag
cagcagcagacccatcctaattcggcattcttcctcggaggaagctcctatagccagcag
ggcttcaacaccgaagagttgctccaaagcaagcccttccacggcatgatgcaactccaa
gatctccaaacagtaagtgcaaacaatgccgccacttcttcctccgccgccaacctgttc
gacctcggattcttctcgggcagcgcgggtaacatcgacaacgttaaccacatgatgaac
aaccacattgacaccaacatgccttctcctttctataacccttccctgcaaggtgagcac
gagcagcagcagcagcagatgccggccaccgcgctgctccacaaagccgcccaaatggaa
ttagcggcgccgacgagcaacttccgcccgagcttctacatgggtggtagagagagcggc
agttcaagaagccaactggagcaggagaaccatttccaggacctcatcaactcgattact
aatggcaacggcagcggtactctagtgttcggtaacgagcaaatggctgcgtttggagga
ttcaaccctgcaggtttggatcaagagagcaagctgcaccacaacctaactgcaggagga
cgaggaggcataacgagagactttctgggagtcggcggcatggtgaggagcatgacgacg
gccggaggagttcacctcggcgttgagaacatcaactccatggactcggagatgaaggct
cgatcatttggtgctggaagaattcagtaa
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