Zingiber officinale (ginger): 122038433
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Entry
122038433 CDS
T08725
Name
(RefSeq) GTP-binding protein YPTM2-like
KO
K07874
Ras-related protein Rab-1A
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122038433
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122038433
04031 GTP-binding proteins [BR:
zof04031
]
122038433
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
122038433
Autophagy
Other autophagy associated proteins
122038433
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122038433
Exosomal proteins of other body fluids (saliva and urine)
122038433
Exosomal proteins of colorectal cancer cells
122038433
GTP-binding proteins [BR:
zof04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
122038433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
SRPRB
MMR_HSR1
GTP_EFTU
Gtr1_RagA
AAA_29
Septin
AAA_22
FeoB_N
AAA_16
AAA_5
ABC_tran
LANC_like
Dioxygenase_N
TniB
Motif
Other DBs
NCBI-GeneID:
122038433
NCBI-ProteinID:
XP_042454117
LinkDB
All DBs
Position
1A:172883684..172913640
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLNEIDRYASDNVNKLLVG
NKSDLTTNKVVSYETAKAFADEIGIPFMETSAKNATHVEQAFMAMTAAIKNRMASQPTGN
SARPPTVQIRGQPVTQKSTCCSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgagtatgactatttattcaaacttttgcttattggagattcaggtgttgga
aagtcttgtttactcctaagatttgcggatgactcctacctggaaagttacatcagtaca
atcggagttgattttaaaatacgcacagtcgagcaggatgggaagaccattaaacttcaa
atttgggatactgctgggcaagagcgtttcagaacaattacaagcagctattaccgtggt
gcccatggtatcattgtggtgtatgatgtgacagaccaggagagcttcaataatgtgaag
acttggttaaatgagattgacagatatgcgagtgataatgtgaacaagcttctggtgggc
aacaagagtgatcttactacaaataaagttgtatcttacgagacagccaaggcatttgct
gatgagatcggtatccctttcatggagactagtgcgaaaaatgctacccacgtggagcag
gccttcatggctatgactgctgccatcaagaacaggatggcgagtcaaccaaccggcaac
agtgcgaggccaccgacagtacaaatccgtggacaacctgtaactcagaagagcacctgc
tgctcatcctga
DBGET
integrated database retrieval system