KEGG   Zingiber officinale (ginger): 122038433
Entry
122038433         CDS       T08725                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122038433
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122038433
   04031 GTP-binding proteins [BR:zof04031]
    122038433
Membrane trafficking [BR:zof04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    122038433
 Autophagy
  Other autophagy associated proteins
    122038433
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122038433
  Exosomal proteins of other body fluids (saliva and urine)
   122038433
  Exosomal proteins of colorectal cancer cells
   122038433
GTP-binding proteins [BR:zof04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    122038433
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase SRPRB MMR_HSR1 GTP_EFTU Gtr1_RagA AAA_29 Septin AAA_22 FeoB_N AAA_16 AAA_5 ABC_tran LANC_like Dioxygenase_N TniB
Other DBs
NCBI-GeneID: 122038433
NCBI-ProteinID: XP_042454117
LinkDB
Position
1A:172883684..172913640
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLNEIDRYASDNVNKLLVG
NKSDLTTNKVVSYETAKAFADEIGIPFMETSAKNATHVEQAFMAMTAAIKNRMASQPTGN
SARPPTVQIRGQPVTQKSTCCSS
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcctgagtatgactatttattcaaacttttgcttattggagattcaggtgttgga
aagtcttgtttactcctaagatttgcggatgactcctacctggaaagttacatcagtaca
atcggagttgattttaaaatacgcacagtcgagcaggatgggaagaccattaaacttcaa
atttgggatactgctgggcaagagcgtttcagaacaattacaagcagctattaccgtggt
gcccatggtatcattgtggtgtatgatgtgacagaccaggagagcttcaataatgtgaag
acttggttaaatgagattgacagatatgcgagtgataatgtgaacaagcttctggtgggc
aacaagagtgatcttactacaaataaagttgtatcttacgagacagccaaggcatttgct
gatgagatcggtatccctttcatggagactagtgcgaaaaatgctacccacgtggagcag
gccttcatggctatgactgctgccatcaagaacaggatggcgagtcaaccaaccggcaac
agtgcgaggccaccgacagtacaaatccgtggacaacctgtaactcagaagagcacctgc
tgctcatcctga

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