Zingiber officinale (ginger): 122038442
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Entry
122038442 CDS
T08725
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome biogenesis
zof04145
Phagocytosis
zof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122038442
04142 Lysosome biogenesis
122038442
04148 Efferocytosis
122038442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122038442
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122038442
Hops complex
122038442
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2753
Motif
Other DBs
NCBI-GeneID:
122038442
NCBI-ProteinID:
XP_042454126
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All DBs
Position
1A:173650650..173718422
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AA seq
597 aa
AA seq
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MAQIPNLDTAPLNLTSLREQSQKELLNILKNIRGNKCLVIDPKLSGSLSLLIQTSLLKEN
GVELRHLSSEPVQTECSKILYLVRSHTNLMKLISSNIHNDLSKGVQREYFLYFVPRRTIV
CEKIFEDEKIHHLLTIGEYPLYMLPLDEDVISFELDLSYKECCVDGDTSSLWHIAKAIHK
LEFSFGFIPNVRAKGKASTKVAEILNSLQVEEPVSSTDLGIPEINTLILLDREVDLVTPM
CFQLTYEGLLDEILQINNGSVEVDTTVMGSQQDGKKVKVPLNSSDKLFKEIRDMNFEVVV
QVLRQKATSIQQDYAEVKSQSQSVSELKDFVKKLNSLPEIARHVNLAQHLQSFTSKPSFH
ARLDMEQTLLELQNYDICFEYIEEMIHKQESLANVLRLLVLFSITNSGLPKKNFDYLRRE
ILHSYGFEHMPTLYNLEKAGLFKKQESKSNWLAIARAFQLIVEDTDTANPKDISYIFSGY
APLSIRLVQHAIRSGWRSMEEILKLLPGPHVDLKRQGVPNSNSFLDANPAFQSNFDRVSD
GRRSLALVIFIGGISFAEIAALRFLSSQEGMGYDFLIGTTKIINGTTLLETLMGYKD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattcccaacctcgacaccgcccctcttaatctcacttcccttagggaacaa
tctcagaaggagctgcttaacatccttaagaatattcgaggtaataaatgcctcgtcatt
gacccaaagctcagtggatcactttctctcttgatccagacgtcgctcctcaaggaaaat
ggtgttgagctgcggcatctctcttccgagcctgttcaaactgaatgttccaagatattg
tatcttgtgcgatcccataccaacttgatgaagctgatttcgtcaaacattcacaatgat
ctatccaaaggagttcagagagaatactttctttattttgttccgcgtcgcacaattgtt
tgtgaaaagatctttgaagatgaaaagattcaccatctattgactattggagaataccct
ttgtacatgttgccactagatgaggatgttatatcttttgagcttgacctgtcatacaag
gaatgctgtgtcgatggtgacacaagttcactttggcatattgctaaagctattcataaa
ttggagttttcctttggatttattccgaatgtgagagcaaaaggaaaggcatcaacaaag
gttgctgaaattttgaatagcctacaagttgaagagccagttagctcaacggatctggga
attcctgagataaatacactcattttattggatagagaggttgatttggtgacacctatg
tgctttcagctaacatatgaaggacttctagatgagattttgcaaatcaataatggttca
gtggaggttgataccactgttatgggcagccagcaagatggaaaaaaggtcaaggttcct
ctgaattctagcgacaaattgttcaaagaaattcgagatatgaactttgaagtcgtggtt
caggttttacgccagaaggcaacttcaattcaacaagattatgcagaagtaaaatctcaa
tcgcaatcagtatcggagctgaaggattttgttaagaagttaaactcactgcctgaaatt
gctaggcatgtaaaccttgctcaacatttgcaatcttttacctctaaaccatctttccat
gctcgattagacatggaacagacacttcttgagctccagaattatgacatatgcttcgag
tacattgaggagatgattcataagcaggaatcacttgccaacgtattgcggttgctggtg
ttattttcgattactaattctggccttccaaagaagaactttgattatttaaggagagag
atactccatagctatggatttgagcacatgcctacactatataatctggaaaaagcaggc
ctctttaagaaacaggaatccaaaagcaactggctggctattgcacgagctttccaactt
attgttgaggacactgacacggccaaccctaaagatatttcatacatattttctggatat
gcaccacttagcattcgtctggtacaacatgcaattcgttctggatggcggtctatggaa
gaaatactgaagctgttaccaggacctcatgtggatctaaagaggcagggtgttcctaat
agcaactcttttctggatgcaaatccagctttccaatctaattttgatagggtcagtgat
ggacgtcggtcgttagctttggtaatcttcattggtggaatatcttttgcagagattgct
gctcttcgttttcttagttcacaggaaggaatggggtatgacttccttattggaactaca
aaaataattaacgggacaactttacttgaaactctcatgggctacaaagattag
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