Zingiber officinale (ginger): 122038506
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Entry
122038506 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122038506 isoform X1
KO
K00599
tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122038506
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122038506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_12
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_16
Methyltransf_11
MTS
PrmA
Cons_hypoth95
Anamorsin_N
Motif
Other DBs
NCBI-GeneID:
122038506
NCBI-ProteinID:
XP_042454218
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Position
1A:177375947..177407247
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AA seq
605 aa
AA seq
DB search
MAEEAATSSMAGELAVPEGAKKIQIYSTSLSSSSARQVTPFWKEKYEKDAKKYWDLFYKR
HQDRFFKDRHYLDKEWGDHFLDREVGKLVVLEVGCGAGNTIFPLVATYPHIFVHACDFSP
RAIELVKASHRNTQSRAPLYSDPWGFPHVHGVARLQSFHGGASGSGHFRNPLWSLRVESH
KDFSADHINAFVCDLTIHNLSEIIAPSSVDIVTMIFVLSAVSPEKMPLVLDNLRRVLKPN
GLVLFRDYATGDLAQERLISKEQEISENFFVRGDGTRAYYFTNKFLVSLFRQSGFNVVNV
HICNKQVMNRSQELVMNRRWIQAVFSNKPTEQNNEPIIHNYSNNYGDAEVDISGSVADLF
CLSSSADEKQVIKIEVKGCSFRIKALTKEYQHTCKSTGLMLWESARLMCNIIAENPSIIV
GKRMLELGCGSAGICSMIAAQHAEVVVSTDGDTEALSLLRENISTNLPKNLLDKIVINRL
IWGNMEDVQAIKDFGCYDRGFDIIIGTDVTYSYGAISPLFETARELICSQENDNHKPALV
LCHIERRINEDSIVSTASTFGFKLVDRWVNGIHSSDGIIRSWFSEGDNYMSFFRNTPLTI
LYFHS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggctgcaacgagttccatggcaggagagttagcggtgccggaaggcgcg
aaaaagattcagatatactccacgtcgttgtcctcttcttcagctagacaagtcacccct
ttttggaaagagaagtatgagaaagatgctaagaaatactgggatctcttctacaagcgc
caccaagacagatttttcaaggatcgacactacttggataaggaatggggcgatcacttt
ttggatagagaggttggaaaacttgttgtattggaggttggttgtggagctgggaacaca
atttttcccttggttgcaacatatccacatatatttgttcatgcctgtgatttttcacca
cgtgctattgagttggtcaaggcatctcaccgcaacacacagagccgcgcgcctctctat
agcgacccgtgggggtttccacatgtccacggggttgcgcgtcttcaaagtttccacggt
ggtgcctcggggtcggggcacttccgtaacccgctttggtcgttgcgggtagagagccac
aaggacttctcagccgatcacatcaatgcatttgtttgtgacctcacaatacataatctc
agtgagataatagcaccttcttcagtggacattgtaaccatgatttttgtgctttctgca
gtttctcctgaaaagatgcctttggtgttagacaatctcaggagggttcttaaaccaaat
ggccttgtactcttccgtgattatgcaactggtgatcttgcacaggaaaggctgatttcc
aaggagcaggagatcagcgagaacttttttgtcagaggtgatggaacacgtgcttattat
tttaccaacaagttcctggtaagcctgttccggcagagtgggttcaatgtggtcaatgtt
catatctgcaataagcaagtgatgaaccgttcacaggaactagtaatgaataggagatgg
attcaagctgtcttctccaataaacctactgaacaaaacaatgaacccatcattcataat
tattctaacaattatggcgatgctgaggttgacatatctggcagtgtcgctgatctgttt
tgtttgtcatcatctgctgatgagaaacaggttatcaagattgaagttaaaggctgcagc
ttcaggataaaagcactgacgaaagaataccaacatacttgcaaatctacggggcttatg
ttgtgggaatcagctcgtctaatgtgcaacataattgcagaaaacccttcaattattgta
ggaaagaggatgctggaattgggttgcggatctgctggtatctgctcaatgattgctgct
cagcatgcagaagtggtagtttctaccgatggggatacagaagctcttagtctcctaaga
gagaacatttccacaaacttgccgaagaatttgcttgataaaattgttattaatagattg
atctggggaaacatggaggatgttcaagccatcaaggattttggttgctatgacagaggt
ttcgatataataataggaactgatgtaacttacagttatggtgctatttcacctctgttc
gagactgcaagagagctgatatgtagccaggaaaatgataatcacaaaccagctcttgtc
ctatgccacattgagagaagaatcaatgaagactcaatagtttctactgcatcaaccttt
ggttttaagcttgttgataggtgggtgaatggcatccattcaagtgatggtatcataaga
tcttggttctcggaaggtgataattacatgagctttttcagaaacacgcccttgactatc
ttgtattttcattcctga
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