Zingiber officinale (ginger): 122038558
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Entry
122038558 CDS
T08725
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122038558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122038558
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122038558
Prokaryotic type
Archaeal type
TFB
122038558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
RB_B
A2L_zn_ribbon
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
122038558
NCBI-ProteinID:
XP_042454289
LinkDB
All DBs
Position
1A:complement(181587416..181594396)
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AA seq
312 aa
AA seq
DB search
MGDAYCSDCKRNTEVVFDHSAGDMVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVISKPNGVQGDFLSSSLGRWQNRGSNPDRNLINAFKGIASMADRLN
LVATIKDRANEIFKKVEDLKSVRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMPNQIVKAAQEAVQKSEEL
DIRRSPISIAAAIIYMITQLYDDKKPLKDISLATGVAEGTIKNAYKDLYPYASRIIPTYF
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgcatattgttcggactgcaagcggaatacggaggttgtgttcgaccattcg
gcgggggacatggtgtgctccgagtgcgggctggtgctggagtcgcattccatcgacgag
acctccgagtggcggaccttcgcaaacgagtccggcgacaatgacccggttcgtgttggc
ggaccttccaaccccctcctgaccgacggcggtctctccaccgtcatctccaagcccaac
ggcgtgcagggcgatttcctctcctcatcgctgggacggtggcaaaaccgagggtccaac
cctgatcggaacctcattaatgctttcaagggcatcgcgtccatggcggacaggttgaac
cttgtggccactataaaggatcgtgccaatgagatatttaagaaagttgaagacctaaaa
tctgttagaggacgaaatcaagatgcaattttagctgcctgtctatatattgcttgtcgg
caagaggacaaacctcgcactgttaaggaaatttgttctgttgccaatggagctacaaag
aaggaaataggacgtgcaaaggagttcattgtaaaacagcttgaagttgagatgggacaa
tctatggagatgggtacaattcatgcaggagatttcttgagacggttttgctcccatctt
ggtatgccaaatcagatagttaaagcagctcaagaagcagttcaaaaatcagaggaactt
gacataaggaggagcccgatttcaattgcagctgctattatctatatgataactcagcta
tatgatgacaagaaacccctcaaagatatatcattggcaactggggtggcagaaggcacc
ataaagaacgcatacaaagatctttatccttatgcttctaggatcattcccacctacttt
gccaaggaagaggatctaaagaacctttgcagtccatag
DBGET
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