Zingiber officinale (ginger): 122038585
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Entry
122038585 CDS
T08725
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122038585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122038585
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
RNases
122038585
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
122038585
NCBI-ProteinID:
XP_042454321
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Position
1A:183028211..183043106
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AA seq
485 aa
AA seq
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MGKAIDRASKEVLAEMVRLTQRQGLKGAAGGWKDFLQCHDKKGSGLSDPIRRSRELLVDF
LQTFTKEQQKVFNKIIRRNNDHNAMKQFKDFAHLESPKQRLVRLTMEHPKYTKEFCFPFY
DEGWVTTHLGEFFEAMKSETMLAIDCEMALCEDGTEAVVKVCVVDQDLQVKLDQLVNPMK
PVADYRTNITGIDSKDLEGVTCSLADIQKSLKKLLSHGTILVGHSLYNDLRAVKVDHLRV
IDTVCIFKFVDLPNFSPSLNTLCKVVLGFPVRNDGEPHNCLNDAQAAMKLVLAKLEHGYE
DLIVTTDVEMPRCDSAKLLLHNIPVEIPAQELHLLFPGDDDVTIESATKQRVESYTTCAV
FRSPVQADKAFDKVNGNLTKDSAGRLQKSVSLKLGSGKTTQLYVRKMTNDPDVSKMLRDE
NAEPLQQQAIDGNGSKRLKTCSYPCDHVKEIEKLREDLRRREEEIFNLQKALAQVKSICD
RELPC
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcgattgatcgtgccagcaaggaggtccttgctgagatggtaagacttact
caaagacaaggactgaaaggtgctgcaggaggatggaaagacttcttacagtgtcacgat
aagaaaggttctggcttaagtgacccaattaggagatcaagagaacttttggttgatttt
ctgcaaacatttacaaaagaacaacagaaggtgttcaataaaataataagaaggaataat
gatcataatgcgatgaagcagttcaaggattttgcacatcttgaatcacctaagcaaagg
ttggtccgtttgacaatggaacatccaaagtacacaaaagagttctgtttcccattctat
gatgagggatgggtaactactcatcttggcgaattttttgaagcaatgaaatcagaaact
atgcttgcgattgattgtgagatggctctttgtgaggatggtactgaagcagtggtgaaa
gtatgtgtagtggatcaagatttgcaggtgaaacttgatcaacttgtaaatcccatgaag
cctgttgctgactatagaaccaacattactgggatagattcaaaagatttagaaggagta
acatgctccttagctgatatacagaaatctttgaagaaacttttatcacatggaacaatc
ctagtgggccatagcttgtataatgatttacgtgctgtaaaagttgatcatcttagagtc
atcgacaccgtatgtatcttcaagtttgtggacttacctaacttttcaccttccttaaac
acattgtgcaaggtagtgttgggttttccagttcgtaatgatggagaaccacataattgt
cttaatgatgcacaagctgctatgaagctagtactcgctaagctagaacatggatatgag
gatctcattgttaccacagatgtcgaaatgccacgttgtgactcggcaaaactactgctg
cacaatattccagttgaaatacctgctcaagagttacacttgctgtttcctggagatgat
gacgtcacaattgagtctgctacaaagcagcgagttgaaagttacacgacatgtgctgtc
ttcagaagtcctgtacaggcagataaagcatttgacaaagttaatggcaatttaacaaag
gattcagctggccgcctccagaaatctgtctctttgaaacttggcagcgggaaaacgacc
cagttatatgtccgcaagatgactaacgacccagatgtgtcaaagatgttgcgagatgag
aatgctgagcccttgcagcaacaagcaatagatggcaatggctcaaaacggctaaaaacg
tgttcgtatccttgtgaccatgttaaagagattgagaaattgagagaggatctgcgtcgt
agggaagaggaaatatttaatttgcaaaaggctctcgcccaagtgaaaagcatttgtgat
agggaactcccatgctga
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