Zingiber officinale (ginger): 122038780
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Entry
122038780 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122038780
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122038780
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122038780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
122038780
NCBI-ProteinID:
XP_042454654
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All DBs
Position
1A:complement(188896385..188901149)
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AA seq
832 aa
AA seq
DB search
MDDSCAVCADPLEWVAYGPCGHREVCSTCVVRLRFVLGDRRCCICKTECPIIFVTKALGD
YTRVVADFSVFLTGATEGKTGQYWYHEDTQAYFDDADHYKMIKAMCRLSCSICDNNSESQ
GGESTKRRTRFRSIEQLNGHLRHQHNLFMCNLCLEGRKVFICEQKLYTRSQLNQHKSTGD
SEVDGTESERGGFMGHPMCEFCRNRFYGDNELYMHMSTEHYTCHICQRQHPGQYDYFRDY
NDLEMHFRQEHFLCENEACLEKKFIVFQTEAEMKRHNALEHGGNMSRSMRNAALRIPTSF
RYRRNEQEQRRGRGRGFRQNSSGDQLTMAIQASLETAADADGRFQDSSFGAHSDSGNRRM
RRVDTGTGSSEVSTVHEGPEGPLNQSTRTTPILEESSFPPLSDRELPEPSSRYAQALSQS
SRNPAKLREESFPPLPGVTNKAKPSHGSEGLSTNTLAARLQRKRDSVVINSAPARPLEYH
EMFPSASQLRTTPNHGITASTFSSSQPRAPTRENLFISPSPASSSVNSDAANRMKHSASV
PNLASGSFSSQAVPIVKREESSTSSNQSHTSTNDVYAVNKSMVEQIRASLGMDEDKYSAF
KSISLEYRQDLINTLEYLSYVEQFGLSHLVLELAHLCPDAQKQKELIDAYNLNLRNKTLR
ENAGISDGRKGKGKTSARAISKANNKLSDNFLDTVKKLQLNQKAQEEEVLHKDGYQASKD
QPRSSGVANSGAIDVNFIETSVDREPQFVTGMTKQNLADGGSSKQRKKTSKFNRVRLGDG
SAAALFDPSRRDAIPEPQENRNADGSSETQPVRGVWRSGGAQRLFANSSKNA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgtgcggtttgcgccgatcccctcgagtgggttgcctacgggccatgt
ggccaccgggaggtctgctccacctgtgtcgtgcgcctccgattcgtgctcggcgatcgc
cgttgttgtatctgcaagaccgagtgcccaattatctttgtcaccaaggctcttggagat
tatactagagtggtagctgatttttcagttttcttaactggagcaactgaagggaaaact
ggacaatattggtaccatgaagacacgcaagcttactttgacgatgctgaccattacaag
atgataaaagcaatgtgtcggctttcctgtagcatctgtgacaataattctgagagtcaa
ggtggcgagagcacaaagaggaggacaagatttaggagcatagaacaattaaatggtcat
ttgaggcatcagcacaacttattcatgtgcaatctatgcttggaaggaagaaaggtattt
atttgcgaacaaaagctatacacaagatcacaactaaatcaacacaagagcactggggac
tctgaggtagatggcactgagagtgaacgcggtgggtttatggggcaccccatgtgcgag
ttttgcagaaatcgattctatggagataatgaactttatatgcacatgtcaacagaacac
tatacctgccatatatgtcaacgacaacatccaggacaatatgattatttcagagattat
aatgacttggagatgcatttccgccaggagcatttcctctgtgaaaatgaggcatgttta
gaaaagaagttcattgtttttcaaactgaagcagagatgaagaggcataatgctcttgag
catggggggaacatgtcgcgttcaatgcgaaatgctgcacttaggataccaacaagcttc
aggtatcggaggaatgaacaagagcagcgccgaggaagaggtcgtggattccgccaaaat
tcttctggtgatcagctgactatggcaatacaagctagccttgaaacagcagcagatgct
gatggtagatttcaggattcttcttttggtgctcattcagacagtgggaataggaggatg
aggcgtgtcgatacaggtactggttcatcagaggtctcaactgtccatgaaggtccagaa
ggacctttgaaccaaagcactaggacaactccgatactagaagaatcctccttccctcct
ctttctgatagagaactaccagagccatcttctagatatgctcaggctcttagtcaaagt
tccagaaatcctgccaaacttagggaagaatcatttcctcctctacctggtgtgactaat
aaggctaagccttctcatggatcagaaggtttgtccacaaatacccttgctgcccgcctc
caacggaagagagactctgttgtgattaactctgctccagcaaggccactagagtatcat
gagatgttcccatctgcttctcaattgaggaccactccaaatcatggcatcacagcatca
actttctcaagttctcaaccacgagcccctacaagagaaaacctatttatatcaccttca
cctgctagttcttctgttaattcagacgctgctaataggatgaagcattcagcatcagtt
cccaacctagcctctgggagtttttcaagccaagctgttcctattgtcaagagagaggaa
tcatcaacttcaagcaatcaatctcatacttccacaaatgatgtttatgctgttaacaaa
tccatggtagaacagattcgagctagcttaggtatggacgaggataaatatagtgcattc
aaaagcatatcattagagtatcgtcaagatctgatcaatacattggagtatctttcttat
gttgagcaatttggcctgtcacatcttgttcttgaacttgctcatctctgtcctgatgct
cagaagcagaaggaactaattgatgcttataatctgaatttacggaacaaaactctgcga
gaaaatgctggcattagtgatggtagaaaaggcaagggaaaaacttctgcccgagctata
agtaaggctaataataaattatctgataactttttggacacagtaaagaagctacaattg
aatcagaaggctcaagaagaagaggtacttcataaggatggctaccaagcttctaaggat
caacctcgttcatcaggagttgccaactctggcgcaattgatgtgaatttcatcgaaact
agtgtcgacagggaaccacaatttgttacgggcatgacaaagcagaatttggctgatggt
gggagcagtaagcaacgcaagaagacatcaaagtttaatagggtacgcctgggcgatggt
tcagcagctgcactttttgatccttctcgcagggatgctattcctgaaccacaagagaac
agaaatgctgatggttcttctgaaacccaaccagtccgaggtgtttggcgaagtggtggt
gcacaaagactttttgctaactctagcaagaatgcctga
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