Zingiber officinale (ginger): 122038812
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Entry
122038812 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122038812
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122038812
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122038812
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122038812
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122038812
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
DUF4398
Motif
Other DBs
NCBI-GeneID:
122038812
NCBI-ProteinID:
XP_042454687
LinkDB
All DBs
Position
1A:complement(189717219..189724459)
Genome browser
AA seq
953 aa
AA seq
DB search
MPLHVDLGFSGAALLLVFFFGPVVALVVRRRWRLVTARQEEVRRLAYLAAQEAALAEMDA
MAAYSATSSEVTKESVALPECAVCSSPAGARCARCKAVRYCSGRCQIIHWRQGHKDECQP
PPVNDKDEDKLSSSSLKGVHSKPSGLSEKRLDPKEDLTSKVETHFERPFASKSTSTDDEI
DGDIHQNSSSKDISANKTFSGSSSPTIPAQSTFPQTISSPDDAYAKKLISNNVGLEESPS
FGIYTVGLRTAVDTSNVTTTMSSTPELATSNPLANFTTHSSRLRVETSTCKTEVDEQIPS
NTSALKNTSSHDQVSTEQYERVGNGIKSSTSSTPEGSSPRAASLEARSHSEGNETQTSKK
ETSRFLASASDHYSTNGGAKSVPFYERSNGNAHRASIGSKNIPHVANGLSTSLKQVVTKV
SRHYSSEFMLFPYDLFIKLYNSDKIDLRPCGLINCGNSCYANAVLQCLAFTRPLTAYFLD
GLHSRICPKKEWCFTCELESLVRNAKEGKSPLSPIGILSHLHNIGSNFGHGQQEDAHEFL
RYAIEAMQSICLKEAVAKPDGLLEETTLIQQTFGGYLRSKIRCSKCKSKSERCERMMDLT
VEIDGDIVTLDDALLRFTSQEILDGENKYKCERCKSYERAKKRLTILEAPNVLTIVLKRF
QSGKFGKLNKAVRFSEYLDLARYMSGDDKSPVYRLYAVIVHIDTMNASFSGHYVCYVKDR
HGKWYKIDDSKVQPVELEVVLSKGAYMLLYARCLPRGPSSVRRAMAQLVHARKNMKDGKG
NRGDLSVAHHGEHYSPYLSNLRPHPNDSASDSSSLFDEGSTCSTESTRDSTSTEESWEHT
SGESDSFSSNSPLRISEDSDGLTRSPLGSRHSLKANRPTPSTMDLGSNATSSGREAEQAG
MGSFLLYPDNSQLSRNLVEHRSRIETDRFRQNEGNSGVLLRRPTRERTAQTFC
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcccctccacgtcgatctagggttctcaggggccgcgctgcttctggtgtttttcttc
gggcccgtggtcgccctcgtggtgcgccggagatggcgcctggtgacggcgaggcaggag
gaggtacggcggctggcgtatcttgctgcccaagaagccgcgctggcggagatggatgcg
atggcggcctactcggccacatcatctgaagtaactaaggagtctgtggctctgccggaa
tgtgccgtgtgttctagtcctgccggtgctaggtgtgcccgatgcaaggctgtcagatat
tgctccggcaggtgccaaattatacattggaggcagggccacaaggatgaatgtcaacct
ccacctgttaatgataaggatgaagacaaattgagttcttctagtctcaagggagtgcat
tccaaaccgtctggcttatcagagaagaggctagatcccaaagaggatctaacttcaaag
gttgagacacattttgagaggccttttgcctctaaatccacttctactgatgatgaaatt
gatggagacatacatcagaatagcagttctaaggacatttctgcaaataaaacattttct
ggttcatcttctccaacaatacctgctcaatcaacatttcctcagaccattagttctcct
gatgatgcttatgccaagaagttaatttcaaataatgttgggttagaagaatctccatct
tttggtatttatactgttggtctcagaactgcagttgataccagcaatgtaactactaca
atgtcttcaactcctgagttggctacatcaaatcctttggcaaatttcaccacacactcc
agtcgtttaagggtggagacatccacatgcaaaacagaagtagatgaacagatacctagt
aatacatctgccttaaaaaacacttcatctcacgatcaagtcagcactgagcagtatgag
agggttggtaatgggattaaatcaagtacatcctcaacacctgaaggctcttctccaaga
gctgcatcattagaagccagatctcactcagaaggaaatgagacacaaacttcaaaaaaa
gaaacatcaagattcttagcttcagcttcggatcactattctactaacggaggtgctaag
tctgttccattctatgaaaggtcaaatggtaatgctcatagagcatctattggttcaaaa
aatattcctcatgtggccaatggtctttcgacatctctgaaacaagttgttactaaagtt
tcgagacactactcttcagaatttatgctatttccatatgatcttttcatcaaactctac
aactctgacaagattgatttgcgcccttgtggtcttattaattgcggaaacagctgttat
gcaaatgctgttctccagtgtttggcatttactcggcctttgactgcatattttcttgat
ggtcttcattctagaatatgtccaaagaaagagtggtgctttacatgtgagcttgaaagc
cttgtgaggaatgcaaaggaagggaaatctcctttatcccccattggaattctctctcat
ttgcacaacattggaagtaattttggccatggacaacaggaagatgcccacgaatttttg
aggtatgctattgaggccatgcagtctatttgcttaaaggaagctgttgcaaaaccagat
ggattattggaggagacaacactcatacagcaaacttttggtggctatttgcggtcaaaa
ataaggtgcagtaaatgcaagagcaagtctgagcgatgtgaaaggatgatggatcttact
gtcgagatagatggtgatattgtcacccttgatgatgctcttctacgttttacatcccaa
gaaatattggatggggagaacaagtataagtgtgaaagatgcaagtcctatgagcgagca
aaaaagagattgactatattggaggctcctaatgtcctgactattgtgttgaaaagattt
cagtctggtaaatttggcaaactcaacaaagctgtcaggttttctgagtaccttgattta
gctcgttacatgagcggtgatgacaagtcccctgtttatcggctttatgctgtaatcgtt
cacatagatacgatgaatgcttccttttctggtcactatgtctgctatgtgaaggataga
catggcaagtggtacaagattgatgatagcaaggtacaacctgtggaacttgaggtggtc
ttgtcaaaaggtgcatacatgcttctttatgctaggtgcttgcctcgtggtccaagttca
gtaaggagagcgatggctcaacttgtacacgctagaaagaacatgaaggatggtaaagga
aaccgtggagatttatcagttgctcaccacggagaacactactctccatatctgtcaaat
ctccgtcctcacccgaacgattctgccagcgacagttcttctctctttgacgaaggttcc
acttgcagcacagagagcactagggactcaactagtacggaagagtcatgggaacacacg
tctggagaatccgattctttcagctcgaatagccccttgagaatctctgaggattctgat
ggactcactcgttctcctctgggctctcggcattccttgaaagcaaatcgccctacacca
tcaacgatggacttgggatcgaatgctacttcctcaggcagggaagctgagcaggccggc
atggggagttttcttttgtatcccgacaatagtcaacttagcaggaatttagttgaacat
cgtagtagaatagagactgatcgatttaggcaaaatgaggggaattctggtgtactattg
agaagacctaccagggaacgaactgcccaaacattttgttaa
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