Zingiber officinale (ginger): 122038881
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Entry
122038881 CDS
T08725
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122038881
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
122038881
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122038881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
122038881
NCBI-ProteinID:
XP_042454777
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Position
1A:191356748..191363923
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AA seq
617 aa
AA seq
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MAPVSQNSNLKKKLNKKIPREEEVRASSKEIESFEFDPGSEEEDDRSQSSDPEDELSSSS
ASSDGEPLADDFLGGSDDSEEVEELGSDSDESDLEAKSRAIDEAKARAEEEAQEELQLNI
KGESDEFILPTKEELEDEAQQPPNLQNIHRRINEIVRVLSNFKSLRQEGASRKDYINQLK
IDIMSYYGYNEFLIETFMEIFPAVELIELLEAFEKGRPECLRTNTLKTRRRDLAGVLINR
GVNLDPIGKWSKVGLVIYDSQVPIGATPEYLAGHYMKQAASSFLPVMALAPQEKERIVDM
AAAPGGKITYIAALMKNTGIIYANEFKESRLKSLTANIHRMGVTNTIICNYDGKEIPKVL
GLNSVDRVLLDAPCTGTGVISKEQSIKTSKTIEDVQTRVFLQKQLILAAIDLVDAKSKTG
GYIVYSTCSMLVHENEAIIDYALKKRDVKVVPCGLDFGRPGFIRFREHRFHPSLEKTRRF
YPHVNNMEGFFVAKLKKLSNSKPATSQPKKEAERKTEAAAITNDNDSEILNGNPEEPTIT
QAVKKNKESNTAIRNAGRYAGKKIKPTGGKKNHWKTPPASVDQAKKKRKFSSNEKNGPRI
KRRKPHQKGGLGNMKET
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgtcgcagaactcaaatctgaagaagaagttgaacaagaagattccaaga
gaggaggaagttcgtgcgtcctccaaagagattgaatctttcgaattcgatccaggctcc
gaggaggaggatgaccgcagccagtcctccgacccggaagacgaattatcctcttcgagt
gcttcttccgacggagaacccctcgctgacgatttcctcggaggcagcgacgatagtgag
gaagtggaagaactggggtcagattcggatgaatctgatctggaggcaaaatcaagagcc
atagacgaggcaaaagcgagggcagaagaggaagcgcaagaggagttgcagcttaatata
aagggggaatctgatgagttcatattgccaacgaaagaggaactcgaagacgaagctcag
caaccgcccaatcttcagaacattcatcggaggatcaatgaaattgtccgcgtgctatct
aatttcaaaagtctgaggcaagagggtgcttcaaggaaggactatattaatcagcttaaa
atagatataatgtcttattatggatacaatgaatttctaattgaaactttcatggagata
tttccagctgttgaactcattgagctacttgaggcttttgaaaagggccgaccagaatgc
ttgcgcacaaatactttaaagactcgtaggcgtgatcttgctggtgttctaataaacaga
ggagtgaatttggatccaataggcaaatggtcaaaggtgggtttagttatttatgattct
caagtgccaattggtgcaactcccgagtatttggcaggacactacatgaaacaagctgca
agttcatttttaccagttatggctcttgctccacaagaaaaggagcgaatagttgacatg
gctgctgctccaggtggtaaaattacatatattgccgcccttatgaagaatacaggaata
atttatgcaaatgaatttaaagagagcaggctgaagtcacttacagctaatatacatcgc
atgggtgttactaatacaataatttgtaactacgatgggaaggagataccaaaggttctt
ggactcaattctgttgatagagtattgttggatgccccctgcactggtactggggttata
tctaaagagcaatctattaaaacatcaaagacgattgaagatgtccagactcgtgttttc
ctgcaaaagcaactcattttagcagcaattgatctagtagatgctaagtcaaagacagga
ggatacatagtatattcaacttgctccatgttggttcatgagaatgaagcaattattgac
tatgcgttaaaaaagagggacgtaaaagttgtgccatgtggcttggactttggtcgccca
ggattcataaggttcagggaacaccgatttcatccatctttggagaaaacaaggagattt
tatccacatgtaaataacatggaaggattttttgttgctaagttgaaaaagctaagcaat
tccaaaccagcaacctctcaacctaagaaagaggcagaaagaaaaactgaggcagcagct
attaccaatgataatgattctgagatcttgaatggaaacccagaggagccaacgattaca
caagcagttaagaaaaataaagaatctaatacagccattaggaatgctggtagatatgca
ggtaagaaaatcaaacccacaggtggtaaaaagaatcattggaaaacgccacctgcatct
gttgatcaggcaaagaaaaaacggaagttttcatctaatgaaaaaaatggccccaggatc
aagagaaggaagcctcaccagaagggaggcttaggcaacatgaaggagacgtga
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