KEGG   Zingiber officinale (ginger): 122038979
Entry
122038979         CDS       T08725                                 
Name
(RefSeq) protein SLOW WALKER 1-like
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122038979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zof03009]
    122038979
Ribosome biogenesis [BR:zof03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122038979
SSDB
Motif
Pfam: UTP15_C WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_TEP1_C Utp13
Other DBs
NCBI-GeneID: 122038979
NCBI-ProteinID: XP_042454905
LinkDB
Position
1A:193313197..193316276
AA seq 540 aa
MADESKPFFPVEKAHHVKPPPPRRPRLNTQESRFWRCFRHSELASGLILPVTALEFSPVA
PFHLAAACSAAVHLYDGGASPSLAPLPHSPLSGFSDVAYSPSFRCDGSLLAAGGESGIVQ
VFRLDKAGPPLRRLSAHARPVRFVRYPRLEDKLHVFSGGDDALLVYWDVPSETQLITFPG
AHRDYIRAGSPSPTSPEVMATGSYDHSIKIWDVRVPSSSNAILSFSHGDPVESVLFLPSG
GLLATAGGNVVKIWDVIGGGRLIHTMEGHNKTVSALSLGRVGNASTALGGGEPRLLSVSI
DGYMKSFDFAAFKITHSMRYPAQLLSIGFSPSGNSRVVGTSNGVIYMGMKKKLLQEEKGT
GSASVFDGYAPEPKKQVLKPTNYRYFHRGQTEKPRETDYPIKRAPKVKLAEHDKLLKKFR
HREALVSVLSKKDPTSTVAVMEELVIRKKLLKCVANLDVDELGLLLRFLHKYATMPRYAR
FLMNLANKVIEMRPEDIQSNKHLSKHVGSLRRRVAEEIMIQRSLQEIQGMISPFLIIAGR
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcggacgagtcgaagcccttctttccggtcgagaaagctcaccacgttaagcccccg
ccgccgcgccgtccccggctcaacacccaggagtcccgcttttggcgctgcttccgccac
tccgagctcgcttccggtctcatcctccccgtcaccgccctcgagttctccccagtggcc
cccttccatcttgccgcggcctgctctgccgccgtgcacctctacgacggcggtgcctct
ccttccctcgcccccctgccccattcgcctctctctggattctccgatgtcgcctactcc
ccatccttccgctgcgacggatcccttctggcagccggtggagagtccggcatcgtccag
gtcttccgccttgacaaggctggcccgcctcttcgacgcctcagcgcccacgctcgcccc
gttcgtttcgtccgctaccctcgcctagaggacaagctccacgtcttctccggcggagat
gatgctctccttgtctactgggacgttccctccgagacccagctaatcaccttccctggc
gcccaccgtgactacatccgcgctgggtcaccctccccgaccagccctgaggtcatggcc
actggctcttatgatcactccatcaaaatctgggacgttcgtgttccatcaagttcgaac
gccatcctcagcttcagccatggggatcccgtggagagtgtactattcttgccttccggt
ggacttctcgccactgcgggtggaaatgttgtcaagatttgggatgttatcggtggtggc
aggttgattcacacaatggaaggccacaacaagactgtctctgcactgtctcttggtagg
gttggaaacgctagtacggcccttggaggtggagaacccagactccttagtgtgtctatc
gatgggtacatgaaaagcttcgactttgcagcctttaagatcacacactccatgaggtac
cctgcgcagctgctttctatcggtttctccccatctggcaattctcgtgttgttgggaca
tcgaatggggtcatttacatgggaatgaaaaagaagctgctgcaagaagagaagggaact
ggaagtgctagtgtttttgatgggtatgctcctgagcctaagaagcaagttctaaagcca
accaactatagatactttcacagaggtcaaacagagaaaccacgagagactgattatccg
atcaagagagcaccaaaggtgaagcttgccgagcatgataagcttttgaagaagtttagg
cacagggaggctcttgtttcagttttgagtaaaaaggatccgactagtacagttgctgtg
atggaggagctagtgatcaggaagaaactgctaaaatgcgtggcaaatttagatgttgat
gagcttggtttgcttctgcgtttcctgcacaagtatgctaccatgccacgttatgcaagg
tttctaatgaacttagcaaataaggttattgagatgcgtccagaggatattcaatcaaat
aagcatttgagcaaacatgttggaagtcttaggcgcagagttgcagaagaaatcatgata
cagcgttctttgcaagagatacagggaatgatttcaccttttctcataatagctggacgt
tga

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