Zingiber officinale (ginger): 122039014
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Entry
122039014 CDS
T08725
Name
(RefSeq) peroxisome biogenesis protein 6-like isoform X1
KO
K13339
peroxin-6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122039014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122039014
Membrane trafficking [BR:
zof04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
122039014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_lid_3
NPHP3_N
Rad17
RNA_helicase
AAA_28
nSTAND3
DUF815
TsaE
AAA_7
AAA_18
AAA_17
AAA_14
bpMoxR
ATPase_2
Parvo_NS1
TIP49
Vps4_C
AAA_25
ATPase
Mg_chelatase
AAA_33
IstB_IS21
PhoH
AAA_24
AAA_2
MCM
Zn_ribbon_Com
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122039014
NCBI-ProteinID:
XP_042454959
LinkDB
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Position
1A:193875685..193881472
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AA seq
963 aa
AA seq
DB search
MDSNLRLARPFSPSLLGGAAMAQRRKPLVLSSTRALIDSVLSSAKSQGVCFDVFEGSAGG
ETRSAADRSGLPLRLTAGILRFTARNGGDGDETENSLMVGVSASVLKRLGITSGSLVLVK
NSETNVGRVAKVKVLDRPLARDSQAISVSSSTPVMNILPSFTYSPEVHPPINQEVAYVTP
MLAFNLGIHVTCLMVLVCGGQDSLMSLFEVEGNKQEKRDYPPLYVELFPWPNCPKYASHL
RISFVKIPECGVLESLRGKSVIEEGDRQDLIDLALNEYFSVDRFLARGDIFYVHVDWHCH
SEMCVACNQKTPKGLSSNIIYFKVMSMEPLDELILRVNCNQTALVLGGSAASAIPPNGLI
ANYDEFKPIHVEMVKTLTSILTPALCPSALLSKFRVAVFLYGSAGCGKRTVVRYVARHLG
VHVIEYSCHDFIESSEKKVSAALTNAFKVASRYSPSILLLRNFDLLATLSSNEGSLSDQV
GIASEVASIVRKFTDPSSMSEDSFRAKVTNDAPFLVEVENLNRQRVFLVAAASSSEALHP
QIRRCFSHEISMNQMNEAQRVSMLSESLGGVTKIANKAVGDDFLKDVTVQTSGFMPRDIK
ALIADAGANFVHRALFYNAKVENGNFSEIIIEGHRPVPNENCSHPFAANLLENEDFSKAL
ERSKKRNASALGTPKVPNIKWEDVGGLEEVKKAILDTVQLPLLHKDLFSSGLRKRSGVLL
YGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARAARPCVIFF
DELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDPALLRP
GRFDKLLYVGVNADVSYRERVLKALARKFKLHENVSLLSVAKKCPPNFTGADMYALCADA
WFHAAKRKVSDVRIDSSSIDKADSVIVEINDFMKVLGDLSPSLSMDELMKYERLREQFEG
GPR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggactccaacttaagattggctcgccctttctctccttccttgctcgggggcgcagcg
atggcgcagagacggaagcccctggtcctgtcctccactcgcgccctaatcgattccgtt
cttagctccgccaaatctcagggcgtatgcttcgatgtattcgaaggttctgccggcggc
gaaactcgctccgccgctgatcgaagcgggctgccactgcgattgaccgctggtattctt
cgattcaccgcaagaaacggcggcgatggcgatgagacggagaactccttaatggttggg
gtgtctgcctctgtgctaaagagactaggcattacgtcggggtcactggttcttgtaaag
aactctgagactaatgttggaagagtcgctaaagttaaagttcttgatcgtccacttgca
agggacagtcaagcaatttctgtttcgtcttctactcctgtcatgaatattttaccttct
ttcacatactcacctgaagttcatcctcccatcaaccaagaagtggcatatgttactccg
atgttagcatttaatcttggaattcatgtaacttgtcttatggttttggtttgtggtggt
caagactctttaatgtcattgtttgaagtggaagggaacaagcaagagaagagagattat
ccccctctgtatgtggagctttttccatggcctaattgtcctaagtatgcttctcatcta
agaatttcctttgtgaaaatccctgaatgtggtgttcttgaatctcttagaggaaaatca
gtaattgaagaaggtgaccgccaagatctgattgatttagcattaaatgagtactttagt
gttgatagatttttggcaagaggagacattttctatgttcatgtagattggcattgccat
tctgaaatgtgtgttgcttgtaaccagaaaactcccaaaggattgtccagtaacataatt
tacttcaaggttatgtctatggagccgttagatgagctcattctccgtgttaactgcaat
caaacagctttagttcttggaggaagtgcagcttctgctattcctcccaatgggcttatt
gccaattatgatgaattcaaacctattcatgttgaaatggttaagacattgacttctatc
ctcactcctgctttatgcccctcagctctattatcaaagttcagagttgcagttttcttg
tatggtagtgcaggttgtggtaagcggactgttgttagatatgtagccagacatttgggt
gttcatgtcatcgagtatagttgtcatgattttattgaatcctcagagaaaaaagtatct
gctgccctaacaaatgcctttaaagtagcttctcgatactcaccatctatacttttgctt
cgcaattttgatctgctggccactttatcttccaatgaaggttcattgtctgatcaagtt
ggcattgcgtctgaagttgcatcaatcgttaggaagttcacagatccaagttccatgagt
gaagattcctttagagcgaaagtgactaatgatgctccatttctagtggaagttgagaat
ttgaacagacaaagagtattcctagttgcagctgctagcagctctgaggcactacaccca
caaattagacgatgcttcagtcatgagataagcatgaaccaaatgaacgaggcacaaaga
gtcagtatgctgtctgagtcactcggaggagttaccaagattgccaataaggcagtgggt
gatgactttctaaaagatgttactgtccaaacctcaggctttatgccccgggatataaag
gctttaattgcagatgctggtgccaactttgtacatagagcattgttttacaacgccaaa
gttgaaaatggaaatttttctgagattattattgaaggccatagacctgtaccgaatgag
aattgttcacatccttttgctgccaatctcctagagaatgaagatttttcaaaagcactg
gaacggtccaagaaaagaaatgcatcagccttaggcacaccaaaagtgccaaatattaaa
tgggaagatgttggtggacttgaagaagtgaagaaagcaattctggacactgtccagcta
cctctgctgcataaagatttattttcatctggtttacgcaagcgttcgggtgttcttctc
tatgggcctccgggaacagggaagacattgttggcaaaagctgtcgcaacagagtgctca
ctgaattttttgagtgtgaagggaccagagttaatcaacatgtacataggagaatctgag
aagaatgtcagagacatttttcagaaggcgagagctgcacgcccttgtgtcattttcttt
gatgaacttgattccctagctcctgctcggggagcctctggggattcaggtggggtcatg
gatagagtggtatcgcagatgcttgcagaaattgatggcttaaatgattctagtcaggat
ctgtttataataggtgcaagtaatagacctgatcttattgacccagcacttctgcgtccc
ggcagatttgacaaacttctgtatgttggagttaacgctgatgtatcttatagagagagg
gttttgaaggctcttgcaaggaaatttaaactccatgagaatgtttctctactctcagtt
gctaagaaatgtccaccaaattttactggtgcagacatgtatgcattatgtgcagatgct
tggtttcatgctgcaaagcgtaaggtatcagatgttcgtatagactcttcgagcatcgat
aaagcagattcagtcatcgtggagatcaatgactttatgaaggtattaggagacttatct
ccctcgttatcgatggacgaattgatgaaatacgaacgcctaagggagcagtttgaagga
ggtccaagatga
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