Zingiber officinale (ginger): 122039616
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Entry
122039616 CDS
T08725
Name
(RefSeq) transcription factor CSA-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122039616
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122039616
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF6581
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122039616
NCBI-ProteinID:
XP_042455087
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Position
2A:complement(45288026..45289613)
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AA seq
335 aa
AA seq
DB search
MASDEVIPIGGIGFFAGQLLPSFVGSSSPSSSREKGCASSGEQAWGFQCFVRGKECHEDE
KRSDQGEEADQAGDGSFNLECVQQQKLCVRGHWRPAEDAKLKELVSHYGPQNWNLIAEKL
EGRSGKSCRLRWFNQLDPRINRSAFAEEEEERLLVAHRLYGNKWALISRLFPGRTDNAVK
NHWHVIMARKHREQSAYRRRKTSALSSLDSPLLSPHAIASDGMELCMPINACNGDTTISN
ARNESASTGTDLSINSFPSTFPASRCPSPAQLFPPCDIFSGLNVSGVAPMVMEAEVSATV
AVTFRWSNAWPQGEADDGRKKIRIPFIDFLGVGAT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatgaggtgattcccataggtggcattgggttctttgctggacaactgctg
ccttcattcgttggatcttcttctccctctagctctagggagaagggatgtgcgagcagt
ggtgagcaagcttggggatttcagtgttttgtaaggggcaaggagtgccatgaggatgag
aagagaagtgaccaaggcgaggaagctgatcaagcaggcgatggcagtttcaatcttgag
tgcgtccaacagcagaagctttgcgtcaggggtcactggaggccagctgaggatgccaag
ctcaaggagcttgtttctcactatggccctcagaactggaacttgattgccgagaagcta
gaaggaagatcagggaagagctgcaggttgaggtggttcaaccagttggacccgaggatt
aacagaagtgccttcgccgaggaggaagaagagagacttttggtcgctcacaggctttac
ggcaacaaatgggcactgatatccaggctctttcccgggaggacagacaacgcagtgaag
aaccattggcatgtgatcatggcaaggaagcatagagagcaatctgcctacaggaggagg
aagacctccgctctctcttccttagactcccccttgctctcacctcacgccattgcctcc
gacggaatggagttgtgcatgcccattaatgcttgcaatggcgataccaccatctccaac
gccagaaacgagtctgcctccaccggcacagacctctccatcaactccttccccagcact
ttccccgcttcccgttgtccttccccagcccagctcttccctccctgtgatatcttcagc
gggttaaatgtctccggagttgcccctatggtcatggaggcagaggtttctgcaactgtt
gcagtgaccttccgctggagcaatgcctggccacaaggggaagcagatgatggaagaaag
aagatcaggataccctttattgatttcctcggcgttggcgcgacatag
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