KEGG   Zingiber officinale (ginger): 122040430
Entry
122040430         CDS       T08725                                 
Name
(RefSeq) protein VACUOLELESS1-like
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    122040430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122040430
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    122040430
   Hops complex
    122040430
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st ANAPC4_WD40 DUF2968
Other DBs
NCBI-GeneID: 122040430
NCBI-ProteinID: XP_042455678
LinkDB
Position
2A:839099..849815
AA seq 843 aa
MAAVSVAGEWQLLYNRFYRKLTIYSMQWGRIDLSRHRVAAAPFGGPVAAIRDDSKIVQLY
AESARRKLLIFNAAGRPLASAVWDRPGGRLVGMAWTDDQVLVCVVQDGTVYSYNVHAELC
APQFSLGKECFEQGVVECVFWGNGMVCITEGFQIFCVPDFKNPVPCKLADPGIEEYPLCV
AVIEPQYTMSGNVEVLLGVGDHVLIVEEDGVQQLGVGVGPFQKMAVSQNGKYLATFTHDG
RLLVILTDFSRIIFEYPCESSLPPEQIAWCGLDSVLLYWDEKELLMVGPNGTPVSYMYDE
PIRLIPECDGVRILSNSSMEFLQRVPDSTVSIFQVGSTLPAALLYDALEHFDRRSAKADE
NLRLIRSSLAEAVEACIDAAGHEFDLSRQRTLLRAASYGRAFCSQFTRDRFQEMCKILRV
LNAVRDHEIGIPLSIQQYKLLTAPVLTGRLINANHHLVALRISQYLSLNPEVVIMHWACA
KITASSAIQDSSLLEILLDKIKLCKGISYAAIASHADNSGRRKLAAMIVDHEPRSSKQVP
LLLSIQEEDSALVKAIDSGDTDLVYLVLFHIWQKKPALDFFGTINARPLARDLFITYSRS
YKHEFLKDFFLSTGRLPEVAILLLKESWKLEKNPMASKGSPLHGPRIRLIEQAQKLFSET
KEHNFEAKAAEEHAKLLRLQHDLEVSTKQAIFVDSSISDTIRTCIVLGNHREAARVRAEF
KVSEKRWYWLKAFALATVRDWDALEKFSKEKRPPGGYKPFVEACIDADEKAEAVKYIPKL
TEPRERSEAYARIGMAKEAAEAASQAKDSEELFGRLKLTLAQNTSASSILDTLRDRLSFQ
GVY
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggcggccgtctccgtcgccggggagtggcagctcctgtacaaccgcttctaccgcaag
ctcaccatctactccatgcagtggggtcgaatcgacctctcccgccaccgcgtcgcggcc
gcccctttcggtggccccgtcgctgctatccgcgacgactccaagatcgttcagctctac
gccgagtccgctcgccgcaaactccttatcttcaacgccgccggccgccccctcgcctcc
gccgtatgggaccgccccggcgggcgcctcgttggaatggcctggaccgacgatcaggta
ctcgtttgtgtcgtccaggatggtaccgtctactcttacaatgtccacgccgagctttgc
gctccgcagttctccttgggaaaggagtgtttcgagcagggcgttgtcgagtgcgttttc
tggggcaacggcatggtgtgcattacggaggggtttcaaatcttctgcgtccccgatttc
aagaatccggtcccgtgcaagcttgctgatccgggaatcgaagagtacccactgtgcgtg
gccgtgatcgagccgcagtacaccatgtctggaaacgtggaagtgctgcttggtgtaggg
gatcacgtgctaatagtggaagaggatggggtgcagcagcttggggtcggcgtggggcct
ttccagaagatggccgtctctcagaatgggaagtatcttgcaacattcacgcacgatgga
cgtctgctggtcatcctgacggacttctctaggataatctttgaatatccttgcgagtct
tcattgcctccagagcagatagcttggtgtgggttagatagtgtgctgctctattgggat
gaaaaggagcttcttatggtgggtcctaatggaactccagtgagttatatgtatgatgaa
cccataagactcattcctgaatgtgatggcgtgaggattctgtcaaattcaagcatggag
tttcttcagcgagttcctgactctactgtttccatctttcaagttggtagcacattacca
gcagctctgctatacgacgccctggagcactttgataggcgcagtgctaaggctgatgaa
aatttaagattgattcgctcctcgttggccgaggcagttgaggcctgtattgatgctgct
gggcatgaatttgatctttcacgccaaaggacattgttgagagctgctagctatggtcga
gctttttgcagtcagtttacacgagatcgtttccaagaaatgtgtaaaatactaagagta
ctaaatgctgtccgcgaccatgaaattggaatccctctcagcattcagcaatacaagttg
ctcactgcaccagtattgactggacgcctgattaatgccaatcaccatcttgtggctttg
agaatttcacaataccttagcctaaacccggaggtggttataatgcattgggcttgtgca
aagataacagcttcatcggctattcaagattcttcactgctggagatcttgcttgacaag
ataaagttatgcaaaggcatatcttatgcagcaattgcctctcatgcagacaacagtggg
cgcagaaaattagctgccatgatcgttgatcatgaaccgcgttcatccaagcaagttcct
ttattattgagcattcaagaggaagactctgccttggtgaaagcaattgatagtggtgat
actgaccttgtttatctcgttctttttcatatttggcagaagaaaccagctttggacttc
tttggaacaataaatgcaaggcctttagctcgagatttgtttatcacatattcaaggtct
tacaaacatgagttcctgaaggatttctttctttcaacaggtcgactcccagaggtagct
atccttttgctaaaagaatcgtggaaattagaaaagaatccaatggcaagcaaaggatct
cctctccatggtccacggattaggcttattgagcaagctcagaagcttttctctgaaacc
aaggaacataactttgaagcaaaagctgcagaagagcatgcaaagctgctgagattgcag
cacgacttggaagtttccacgaaacaggcaatatttgttgactctagcatcagtgatacg
atacgaacatgcattgtgctgggaaatcatagggaggcagcgagagtaagggcagaattt
aaggtttctgagaaaagatggtactggctaaaagcatttgcactcgctacagttagagac
tgggatgctctagaaaagttttcaaaggagaaaaggccacctggcggttataaaccgttt
gtggaagcatgcattgatgctgatgagaaagctgaagccgtcaagtacattccaaaactt
acagagccaagagaaagatcggaggcttatgcacgcattggaatggctaaagaagctgct
gaagctgcttctcaagctaaagacagcgaagaactatttgggcgcctcaagctcacactg
gcacaaaatacgtctgcttcatccattttagacaccttgagggatcgattatccttccaa
ggagtctattag

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