Zingiber officinale (ginger): 122040571
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Entry
122040571 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122040571
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122040571
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122040571
03036 Chromosome and associated proteins [BR:
zof03036
]
122040571
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122040571
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122040571
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122040571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
122040571
NCBI-ProteinID:
XP_042455866
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All DBs
Position
2A:3835060..3838553
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AA seq
541 aa
AA seq
DB search
MACHLELPFEVDILIGLASDLWALTSAWARSDSIPNLGAMWKQFLCKLPRKSSKSDASGS
NVTTSSNGKPIHRTSSGSLVPSRSTTVKRTASSIFPSSVVTSIEPLLLFKDVPNTEKQNL
LINKLNLCYVIFDFSDPNKNSAEKDMKRQALLDIIDYVDTGGSRFTEPTIAAICKMFASN
LFRVFPPNTRSSTGGVETEEEEPVFEPAWSHLQLVYDLLLKFIESSSLDAKIAKKYVDHT
FIVRLLHLFDSEDPRERDCLKAILHRVYGKFMAHRPFIRKMISNVFYQFMFETNRHNGIA
ELLEVFGSIISGFALPLKEEHKLFLCKVLIPLHKPKTLGIYHQQLTYCVIQFVEKEPKLV
TSVLNGLLRYWPVINSQKEVMFLSELEEILETTNDVDIQKCVLPLFRRVGCCINSSHFQV
AERALLMCNNDRVINLVSHNRQVVMPLILPALERNILTHWNQGVLNLTQNVNKVLCEMDE
ELFLACKRNFEEEETKQELTEQNRRMAWEYLETAAAFQPVTRNVAVLVKPVISPPVVAAL
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgccatctggaactcccgttcgaggttgacatcttgattgggctcgcttcagat
ctctgggcattgacatcagcatgggctcgatctgattccatccccaacttgggcgccatg
tggaagcaattcctctgcaaattacctcgaaagtcttccaaatctgatgcttccggcagc
aatgtgacgacctcttcgaacgggaagccaatccatcggaccagcagtggcagtttagtt
ccctcccgatcaaccactgtcaagcggactgcttcttccatcttcccgtcaagtgtagtc
acaagcatcgaacctctacttctattcaaggatgtccccaacacggaaaagcagaacctt
ttgatcaataaattgaatctctgttacgttatcttcgatttctcggatcccaacaagaac
tctgctgagaaggatatgaaacggcaggcattattagatatcatcgattatgttgatact
gggggttctcgcttcacggaacccaccattgctgctatctgtaagatgttcgccagcaac
ttgtttagggtcttcccacctaatactcgatccagtactggcggcgtggagactgaagaa
gaagaacccgtgtttgaaccagcttggtcccatctgcaacttgtctatgatttgctcctt
aagttcatagagtcatcctcacttgatgccaaaattgcgaagaagtatgtggatcataca
ttcattgtgagactgctacacctctttgattccgaggatcctagggagagggattgcttg
aaagcaatcttgcacagggtctatggaaaattcatggcacatcggcctttcatccggaaa
atgataagcaatgtattttaccagtttatgtttgagacaaaccgacataacggtattgct
gaattgttagaagtttttggtagtatcatcagtgggtttgcattacctctaaaagaggag
cataaactgttcttgtgtaaggtcctaattccactgcacaagccaaaaacactaggtatc
tatcatcaacaactgacttattgtgtgatacaattcgtcgagaaagagcctaagctggta
acatcagttctaaatgggttattgagatattggcctgtgattaacagtcagaaggaagtt
atgtttttaagtgagttggaagaaattttggagactacaaatgatgtggatatccaaaag
tgtgtgcttccgttgttccgtagggttggatgctgcattaatagttctcatttccaggtt
gcagagagggccttactcatgtgcaacaatgaccgagtgattaatctggtgtcgcacaat
cgacaagtagtaatgccgctaatcttgccagctttagagaggaacattctcactcattgg
aatcaaggtgttttgaacttgacacaaaacgttaacaaggtattatgtgagatggatgaa
gagctatttctggcctgcaaaaggaacttcgaggaggaggaaacgaagcaagaattaacg
gagcagaaccgaaggatggcctgggagtacttggagactgccgcagctttccaaccagta
actagaaatgtagccgtcctagttaaacctgttatttctccaccagtcgttgccgcactc
tcttaa
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